Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3913 ATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACGGATGAAGAGCTTGTTGGTTACTACCTGAGGAAGAAAGTTGCATCTCAGAAGATTGATCTTGACGTTATCAGAGAGATCGATCTCTACCGCATCGAGCCATGGGATCTCCAAGAGAGATGCAGGATCGGGTATGAGGAGCAGAATGAGTGGTACTTCTTCAGCCACAAGGACAAGAAGTATCCAACGGGAACAAGGACCAATAGGGCCACTATGGCTGGCTTCTGGAAGGCCACTGGAAGAGACAAGGCTGTGTTCGACAAGTCCAAGCTCATTGGTATGAGGAAGACCCTTGTTTTCTACAAAGGAAGAGCTCCTAATGGTCACAAAACTGACTGGATCATGCATGAGTATAGGCTTGAATCTGATGACAATAATGCCCCTCCTCAGGCAAGAAGAAGGATGGGTAGTATGCAGAGCATTCAAGAAGAGAAGCAATGGGGTAACGAAGAGCGTAGAAGGATGGGGTGGGAGTTACTTGTACGAAGAAACAAGTGGAGCGAGTCCTATGCTGGAGCCTCAGTCTGA 567 0.4868 MESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVFDKSKLIGMRKTLVFYKGRAPNGHKTDWIMHEYRLESDDNNAPPQARRRMGSMQSIQEEKQWGNEERRRMGWELLVRRNKWSESYAGASV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3913 188 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 3 139 - -
Sto6g3913 188 Gene3D NAC domain 14 165 IPR036093 GO:0003677|GO:0006355
Sto6g3913 188 MobiDBLite consensus disorder prediction 137 160 - -
Sto6g3913 188 Pfam No apical meristem (NAM) protein 6 133 IPR003441 GO:0003677|GO:0006355
Sto6g3913 188 ProSiteProfiles NAC domain profile. 5 157 IPR003441 GO:0003677|GO:0006355
Sto6g3913 188 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 3 139 - -
Sto6g3913 188 SUPERFAMILY NAC domain 3 140 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3913 Sto-Chr6 43328991 43330395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3913 1 143 NAC Transcription Factor Family AT2G18060 93.056 1.93e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto6g3913 NAM 8.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3913 - - pop:7480169 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3913 6 43328991 43330395 Sto11g1499 11 14222097 14222797 CCT
Sto6g3913 6 43328991 43330395 Sto6g3913 6 43328991 43330395 ECH