Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3910 ATGcctcctcttctttttctcttggTGCTCTGCGCACCCTTCTTATCGTACGCCGACCGTTCTGGCGTTACCATTGCAGAGATCGGAGCCTTGACCTCTTTCAAGCTCAACCTTCAGGATCCTCTCGGCGCTCTCAACGGCTGGGATCCCTCCTCGCCCGCCGCTCCTTGCGACTGGCGTGGCGTTGCCTGCGTCAACAACCGAGTCACTGACCTCCGCTTGCCTCGGCTTCAGCTCAGTGGGCGCCTCACCGAACGTCTTTCCGACTTGCGCATGTTGCGAAAGCTCAGCCTTCGCTCTAACTCCTTCAACGGAACCATTCCTTCGTCGCTTTGCAAATGCACGTCCCTACGTGCCGTGTTTCTGCAGTACAACTCACTCTCCGGGAATCTTCCATCAGAGATCGGAAACCTCACTGGTCTTCAGATTCTTAATGTCGCCCAAAACCGTCTCTCCGGTGGAATCCCCGGTGACCTTCCGTTGAGTCTCAAGTACGTCGACGTCTCATCAAACTccttttccggcgagattccgagTACCGTTGCTAATCTGTCTCAGCTTCAGCTCATCAACCTGTCGTACAACcagttttccggcgagattccggcgagcTTTGGAGAACTTCAGCAGCTTCAGTACCTCTGGCTTGATCACAATCTTCTCGGCGGGACTCTGCCTTCGGCACTCGCTAATTGCTCTTCGCTCGTGCATCTGAGCGTCGAAGGAAATGCACTTGGAGGAGTAATTCCCGCGGCCATTGCAGCCCTTCCGAAGCTTCAGGTGATAGCCCTCTCGCAGAATAATCTTACCGGTTCAATTCCGGCTTCTATTTTCTGCAACATTTCGGTCTACACGCCGTCACTTCGAATTGTTCAACTAGGATTTAATGGATTCACGGATATTGTTGAACCAGAGGCATCAACGTGTTTCAGTATTGTTCAGGTTTTGGATATTCAGCATAATAACATACACGGCAGGTTTCCCTTGTGGATAACCAATGTGTCCACCCTAACAATGCTTGATGTTTCAAATAATGCATTTTCTGGTGAGATTCCGCCAGAAATAGGAAAGCTCCAGAAATTGGAGGAGTTAAAGGTGGCCAACAATTCATTTACTGGGATGATTCCGGAGGAAATCAAGAAATGTGCATTCCTACGTGTGGTTGATTTTGAAGGCAACCGGTTTGCCGGAGAAGTTCCTTCGTTTTTTGGTTATATGACAGGTCTGAAGGTGCTGTCCTTTGGGGAGAATCTTTTCTCTGGTTCAGTTCCGCAGAGTTATGGCAGACTTTCGGCGCTTGAAACCTTGAGTTTGAGAGGTAATAGCTTGAACGGAACTATGCCTGAGGAGGTAATGGGATTGGGCAATATTTCTACACTTGATCTTAGTGGAAACAAGTTTACAGGTCAAATTTCTGCTAGTATTGGGAACCTGAGTAGATTAACGGTTCTCAATCTTAGTGGATCAATTCCTCCGGAGATTGGAAACTGCTCAGATATTGAAATTCTTGAGCTTAGTTCAAATTCTCTGACGGGTCATATTCCAACTGATATCATCCGACTCTCCCATTTGAAGGTGCTTGATTTGAGTAGGAACAATTTAACTGGAGATATACCTGGCGATATATCCAAATGCTCCTCTTTATCTGAACTGTTAGTGGATCACAACCATCTTTCAGGTACTATACCAGAGTCTTTGTCTGAGCTATCAAATCTGACAATGCTGGATCTCTCTGCTAACAACTTGAGTGGGGAAATATCCAGCAACATTTCCATGATCCCTAATTTAGTGTACTTCAATGTCTCCGGCAATAACCTAGAAGGTGAGATACCTTCGGTGTTAGGTTCTCGTTTCAACAATCCATCTGCATTTGCAAATAACAAGAACTTATGCGGGAAGCCCTTGGATAGAAAGTGTGATAATATAGTAGATAGAGACAGgaagagattgattgtgttgaTTGTTGTAATTGTTGCGGGAGCTTGCTTATTGGCATTATGTTGCTGCTTCTACATTTTCAGCCTATTGAGATGGCGTAAAAGGCTTAAAGAAGGGGCGTCTGGGGAGAAAAAGAGGAGTCCTGCCAGGGCGAGTTCTGGAGCAAGTGGAGGTCGAGGTAGCACCGATAATGGTGGACCAAAACTGGTCATGTTCAATACCAAAATTACACTTGCTGAAACAATTGAAGCAACTAGGCAATTTGATGAGGAAAATGTGCTGAGCAGAACAAGGTATGGATTGGTATTCAAAGCCTGCTACAATGATGGAATAGTGCTTTCAATTCGCAGACTCCCAGATGGATCACTGGACGAAAACATGTTCAGGAAAGAAGCAGAATCACTAGGGAAAGTGAAGCACCGGAATTTAACCGTTCTCAGAGGTTACTACGCTGGGCCACCTGACATGAGGCTTCTGGTCTATGATTACATGCCCAATGGAAACCTCGCAACCCTTCTCCAAGAAGCCTCTCATCAAGATGGTCATGTTCTGAATTGGCCAATGCGCCACCTCATTGCACTTGGAATTGCTCGTGGCTTAGCTTTCCTACATCAATCCTCAATGGTTCATGGGGACGTGAAACCACAAAGTGTCCTGTTCGATGCCGATTTTGAAGCCCATTTGTCAGATTTTGGTCTCGACCGTCTAACCATAGCAACCCCAGGATTGCTTGAGCTCGACCCAGAATCATCAGAGTGGGAAGAGTTCTTGCTGGGTGTGAAAGTAGGCTTACTTTGCACAGCACCAGATCCTCTTGATCGACCAACCATGTCTGACATTGTCTTCATGCTTGAAGGTTGCCGTGTGGGGCCCGACATTCCATCCTCCGCCGATCCCACCTCTCAACCTTCTCCGGCATGA 2859 0.4551 MPPLLFLLVLCAPFLSYADRSGVTIAEIGALTSFKLNLQDPLGALNGWDPSSPAAPCDWRGVACVNNRVTDLRLPRLQLSGRLTERLSDLRMLRKLSLRSNSFNGTIPSSLCKCTSLRAVFLQYNSLSGNLPSEIGNLTGLQILNVAQNRLSGGIPGDLPLSLKYVDVSSNSFSGEIPSTVANLSQLQLINLSYNQFSGEIPASFGELQQLQYLWLDHNLLGGTLPSALANCSSLVHLSVEGNALGGVIPAAIAALPKLQVIALSQNNLTGSIPASIFCNISVYTPSLRIVQLGFNGFTDIVEPEASTCFSIVQVLDIQHNNIHGRFPLWITNVSTLTMLDVSNNAFSGEIPPEIGKLQKLEELKVANNSFTGMIPEEIKKCAFLRVVDFEGNRFAGEVPSFFGYMTGLKVLSFGENLFSGSVPQSYGRLSALETLSLRGNSLNGTMPEEVMGLGNISTLDLSGNKFTGQISASIGNLSRLTVLNLSGSIPPEIGNCSDIEILELSSNSLTGHIPTDIIRLSHLKVLDLSRNNLTGDIPGDISKCSSLSELLVDHNHLSGTIPESLSELSNLTMLDLSANNLSGEISSNISMIPNLVYFNVSGNNLEGEIPSVLGSRFNNPSAFANNKNLCGKPLDRKCDNIVDRDRKRLIVLIVVIVAGACLLALCCCFYIFSLLRWRKRLKEGASGEKKRSPARASSGASGGRGSTDNGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGIVLSIRRLPDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGDVKPQSVLFDADFEAHLSDFGLDRLTIATPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3910 952 PRINTS Leucine-rich repeat signature 524 537 - -
Sto6g3910 952 PRINTS Leucine-rich repeat signature 569 582 - -
Sto6g3910 952 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Sto6g3910 952 Gene3D Ribonuclease Inhibitor 26 159 IPR032675 -
Sto6g3910 952 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 5 566 - -
Sto6g3910 952 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 886 948 - -
Sto6g3910 952 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 564 885 - -
Sto6g3910 952 SUPERFAMILY RNI-like 316 630 - -
Sto6g3910 952 Gene3D Ribonuclease Inhibitor 160 279 IPR032675 -
Sto6g3910 952 SMART LRR_typ_2 208 232 IPR003591 -
Sto6g3910 952 SMART LRR_typ_2 138 162 IPR003591 -
Sto6g3910 952 SMART LRR_typ_2 430 454 IPR003591 -
Sto6g3910 952 SMART LRR_typ_2 184 207 IPR003591 -
Sto6g3910 952 SMART LRR_typ_2 334 358 IPR003591 -
Sto6g3910 952 SMART LRR_typ_2 521 545 IPR003591 -
Sto6g3910 952 SMART LRR_typ_2 478 497 IPR003591 -
Sto6g3910 952 SMART LRR_typ_2 90 114 IPR003591 -
Sto6g3910 952 SMART LRR_typ_2 569 600 IPR003591 -
Sto6g3910 952 SMART LRR_typ_2 256 280 IPR003591 -
Sto6g3910 952 SUPERFAMILY Protein kinase-like (PK-like) 714 940 IPR011009 -
Sto6g3910 952 ProSiteProfiles Protein kinase domain profile. 734 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3910 952 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 564 885 - -
Sto6g3910 952 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 566 - -
Sto6g3910 952 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 886 948 - -
Sto6g3910 952 SMART LRR_sd22_2 569 592 - -
Sto6g3910 952 SMART LRR_sd22_2 521 550 - -
Sto6g3910 952 SMART LRR_sd22_2 430 453 - -
Sto6g3910 952 SMART LRR_sd22_2 454 480 - -
Sto6g3910 952 SMART LRR_sd22_2 256 283 - -
Sto6g3910 952 SMART LRR_sd22_2 208 234 - -
Sto6g3910 952 MobiDBLite consensus disorder prediction 687 714 - -
Sto6g3910 952 ProSiteProfiles Leucine-rich repeat profile. 523 545 IPR001611 GO:0005515
Sto6g3910 952 Pfam Protein tyrosine and serine/threonine kinase 738 883 IPR001245 GO:0004672|GO:0006468
Sto6g3910 952 Gene3D Transferase(Phosphotransferase) domain 1 810 897 - -
Sto6g3910 952 Pfam Leucine rich repeat 162 221 IPR001611 GO:0005515
Sto6g3910 952 Pfam Leucine rich repeat 501 558 IPR001611 GO:0005515
Sto6g3910 952 Gene3D Phosphorylase Kinase; domain 1 710 809 - -
Sto6g3910 952 Gene3D Ribonuclease Inhibitor 280 642 IPR032675 -
Sto6g3910 952 SUPERFAMILY L domain-like 30 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3910 Sto-Chr6 43311097 43314483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3910 893 952 Receptor kinase-like Gene Family AT4G36180 93.333 1.84e-30 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Sto6g3910 PK_Tyr_Ser-Thr 1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3910 - - gmx:100784869 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3910 6 43311097 43314483 Sto6g3910 6 43311097 43314483 ECH