Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3897 ATGGATTCCCTTGTAGTACCTCTCCTCTTGTTCATCTTATTTCTGGTGGCAATAGTAATATTAGTGGTTCGAAGGCGTGGAAGGGCACCCTATCCACCTGGACCCAAGGGCCTCCCCATCATAGGAAACATGAGCATCATGGATCAGCTAACTCACAGAGGCCTAGCCAAGCTAGCCAACCAATACGGCGGCGTTTTCTACCTCCGCATGGGCTTCCTCCACATGGTCACCATCTCCACCCCCGACGCCGCTCGTCAAGTCCTCCAACTCCAAGACAACATCTTCTCCAATCGCCCAGCCACCATCGCCATCACTTATCTCACCTACCACCGAGCCGACATGGCCTTCGCTCACTACGGTCCCTTCTGGCGCCAGATGCGTAAGCTCTGCGTCATCAAACTCTTCAGCCGCAAGCGCGCCGAGTCATGGCAGTCCGTACGAGACGAAGTGGATAGGGCTGTGCGTACGGTGATGGCTAATAGCGGGAAGGCCGTGAATGTGGGGGAAATGGTCTTTTGTCTcaccaaaaatattatatatcgtGCAGCCTTCGGGTGTAGCTCTCAGGAAGGACAAGATGAGTTTATTGGGATACTCCAGGAATTCTCCAAGTTGTTCGGAGCTTTCAATATATCCGACTTCGTACCCTGTCTCGGGTGGGTCGACCCGCAGGGCCTCACTGCCAGATTGACCAAGGCTCGTGCGGCTCTTGATAGCTTCATAGACAACATCATCGACCAACATATGGAGAAGAAGAAACTCACTCATAATAATGAACAAACTGACATGGTAGATGAGTTGTTGGCTTTTTACACTACTAATAGTGACCACTCTAATAAACTCTCCCAATCTGATGATCTCCACAACTCCATCAAACTCACCAAGGATAATATCAAGGCCATCATCAtgGACGTGATGTTTGGAGGGACGGAGACGGTGGCATCGGCAATAGAGTGGGCCATGTCGGAGCTGATGAGAAGCCCAGAAGATCTGAAAAGGGTCCAACAAGAATTGGCTGACGTGGTGGGTCTGGATCGCACGGTGGAGGAATCCGACTTCGACAACCTCACCTATCTTAGATGCGTACTTAAAGAGACACTCCGTCTCCACCCTCCCATCCCCCTCCTCCTCCACGAGACGGCGGAGGACGCGGTGGTTTCCGGCTATTTCATTCCCAAGAAGGCACGAGTCATGATCAACGCGTGGGCCATTGGCAGGGACCCCAACTCTTGGGAAGAACCCGACACCTTTAAGCCCGCCCGGTTCTTGAAGGAGGGCGTGCCCGATTTCAAAGGGAACAACTTCGAGTTCATTCCATTTGGATCGGGTCGGAGGTCATGCCCCGGGATGCAACTCGGGCTGTACGCGCTGGACTTGGCCGTGGCCCACCTTCTCCACTGTTTCACGTGGGAGTTGCCGGATGGGATGAAGCCCAGTGAGATGGACATGAGTGACGTCTTCGGACTCACCGCTCCCAGGGCGAGTCGACTCGTCGCGGTACCCAGAAAGCGCGTGATGTGTCCTCTCTAG 1530 0.5301 MDSLVVPLLLFILFLVAIVILVVRRRGRAPYPPGPKGLPIIGNMSIMDQLTHRGLAKLANQYGGVFYLRMGFLHMVTISTPDAARQVLQLQDNIFSNRPATIAITYLTYHRADMAFAHYGPFWRQMRKLCVIKLFSRKRAESWQSVRDEVDRAVRTVMANSGKAVNVGEMVFCLTKNIIYRAAFGCSSQEGQDEFIGILQEFSKLFGAFNISDFVPCLGWVDPQGLTARLTKARAALDSFIDNIIDQHMEKKKLTHNNEQTDMVDELLAFYTTNSDHSNKLSQSDDLHNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMSELMRSPEDLKRVQQELADVVGLDRTVEESDFDNLTYLRCVLKETLRLHPPIPLLLHETAEDAVVSGYFIPKKARVMINAWAIGRDPNSWEEPDTFKPARFLKEGVPDFKGNNFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSEMDMSDVFGLTAPRASRLVAVPRKRVMCPL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3897 509 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 8 509 - -
Sto6g3897 509 SUPERFAMILY Cytochrome P450 25 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Sto6g3897 509 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 PANTHER CYTOCHROME P450 84A1-RELATED 8 509 - -
Sto6g3897 509 Gene3D Cytochrome P450 24 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto6g3897 509 Pfam Cytochrome P450 32 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3897 Sto-Chr6 43245170 43246847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3897 39 509 Monolignol Biosynthesis Gene Families AT4G36220 73.950 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3897 K09755 - gmx:100783430 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1509 11 14288333 14289995 Sto6g3897 6 43245170 43246847 CCT
Sto6g3897 6 43245170 43246847 Sto11g1509 11 14288333 14289995 ECH
Sto6g3897 6 43245170 43246847 Sto6g3897 6 43245170 43246847 ECH