Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3880 ATGATGCCTGAACGAACCAAGCTGCACATAGCCTTGCTGTTTTTACAATTTTGTCATGCGGGAAACCATGTCTTTCTGAGAATTGCACTTAATATGGGCGTAAGCAAGCTGGTGTTTCCAGTTTATCGAAACATTATTGCTCTGCTTCTTCTGGGTCCCCTTGCTTATTTTGCAGAGAAGAACCAAAGGCCAGCATTAACCCTTTACTGTGTACTACGATTCTTCCTACTTGGACTTGTTGGAATAACAATGAAAGAAGGATTCTACCTCGTGGGGTTAGAAAACACATCACCTACATTTGCTTCTGCTATGCAGAATTCCGTTCCAGCTCTTACCTTTCTCATGGCTGCACTACTCAGGCAAGCTATAATTAAGCACAAATTTGAGAGCGTACAGCTGAACAGGATATCTGGTTTGGCTAAGGTGCTTGGAGTCATTGCTTCAGTTGCAGGAGCTTCAGTAATTACCCTTTTCAAGGGACCTGTCATTTATACTCCACTGTCAGCCCTACATCAGAAACAATTGTTGCCTTTATTAGGGGATGGCCATGATAAAAGCTGGACCTTGGGTTGCATCTGTCTCTTTGGTCACTCCCTAAGCTGGGCTGGTTGGATTGTTATGCAAGCATCTGTCCTCAAAAAATTCCCAGCCCCACTCTCAGTTTCTGCCTCCACTTGCTTCTTTGGTGTTATGCAGTTTCTAACACTTGCAGCCTCTTTGGAGCAGAATTCTGAAGCCTGGAAGCTTAACTCTAGCGGCGAGCTCTACAGCGTTTTGTACGCGGGAGTTGTAATTTCAGCGTTAGCAGCAGCGTTACAGATATGGACTATTGACAAGGGAGGGCCAGTGTTTGCTTCTGTTTATCTGCCTGTTCAGACAATAATTGTAGCTTTAATCACATCTTTTGCCTTAGGTGAAGAATTCTTCTTGGGAGGAATTATTGGAGCTTTCCTGATCATAACTGGACTATACCTTGTTGCCTGGGGAAAAGGTGAAGAAACCAAGCCTGGCAAAGAAAGCACAATACCCTGTGCTCCCAAAAAGCATTTGGAAGAAAATAGTGAAAATTCATCCCTTGTCCAACCATTGATTCCACCACAAACCCCTTAG 1110 0.4396 MMPERTKLHIALLFLQFCHAGNHVFLRIALNMGVSKLVFPVYRNIIALLLLGPLAYFAEKNQRPALTLYCVLRFFLLGLVGITMKEGFYLVGLENTSPTFASAMQNSVPALTFLMAALLRQAIIKHKFESVQLNRISGLAKVLGVIASVAGASVITLFKGPVIYTPLSALHQKQLLPLLGDGHDKSWTLGCICLFGHSLSWAGWIVMQASVLKKFPAPLSVSASTCFFGVMQFLTLAASLEQNSEAWKLNSSGELYSVLYAGVVISALAAALQIWTIDKGGPVFASVYLPVQTIIVALITSFALGEEFFLGGIIGAFLIITGLYLVAWGKGEETKPGKESTIPCAPKKHLEENSENSSLVQPLIPPQTP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3880 369 PANTHER WAT1-RELATED PROTEIN 5 340 IPR030184 GO:0016021|GO:0022857
Sto6g3880 369 MobiDBLite consensus disorder prediction 350 369 - -
Sto6g3880 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 331 - -
Sto6g3880 369 PANTHER WAT1-RELATED PROTEIN 5 340 - -
Sto6g3880 369 MobiDBLite consensus disorder prediction 355 369 - -
Sto6g3880 369 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Sto6g3880 369 Pfam EamA-like transporter family 10 120 IPR000620 GO:0016020|GO:0016021
Sto6g3880 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3880 Sto-Chr6 43146455 43148280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3880 2 368 Nodulin-like Gene Family AT1G75500 57.632 1.12e-148 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3880 - - gmx:100790386 499.975