Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3850 ATGGCTCTTATGCGAGAAATATATGATGATGCATGTTCCAATATATCTCATGATTTGAGAAAATTCCCCGTTCAGGAGAGAAGGGCGACGAAAGTAAGTGTTCCAATTACGTCCAGCTCACATCACATAGAGCTCAATGTAAATGTGGAACCAGATGCTAAATATGCTTTAATGGGATTAGTTAAGGAAATAAGCGGTGAATATGCGATTACCCCTGAAGTCAGTAATATGAATTTCAAGTCAGATTATAAAGTTTTAGTTCTTTACGAGGTTGACAAAGCAGGAGACAACATCCAACACATGATCAAATGGATTATGGATCGCTATTCAGATATATGCAAACTGGTCGTTTGCTGTGAAGATGACGTAGACATTCTTGAACCTGTCAAAAACCGGATGAAATTGATTAACGTTGATGCTCCTCTAACTCACGAAAGTATGGATGTTCTTCTTCAGATAGCAAAGCTAGAGGAAATTGATGTACCCATGAACTTTGCTGCTAAGATTGTAACGAAGTCAAAGCAGAATCTGAGGAATGCAATCATGGCTCTTGAAGCGTGCAAAGCACACAACTATCCATTTTCAGAAGAACAACCAATTCCGGTTGGATGGGAGGACACTGTAAATGAAATCTCTGCAGAGATCCTTGATGATCCATCATATTCACgCTTATTCTCAATAAGGGGAAAACTTCAGAAGCTTCTAGTGGATTTTGTCCACCCCAAGCTGATCCTGCGGAAACTAGTTGAACAACTGTTGAAAGGAATTGACGCAAGCTTGAAAAGAGAGCTATTCTACTGGCATGCTTATTATgACAAAAGACTCCCACCAGGAACTACAGCTTTACTGAAATTAGAAGAATTTGTGGCCAAGTTCATGAGCATATACAGAAAAAGCTCTAGCAGTCGGCAGGTTGTGTAG 921 0.3963 MALMREIYDDACSNISHDLRKFPVQERRATKVSVPITSSSHHIELNVNVEPDAKYALMGLVKEISGEYAITPEVSNMNFKSDYKVLVLYEVDKAGDNIQHMIKWIMDRYSDICKLVVCCEDDVDILEPVKNRMKLINVDAPLTHESMDVLLQIAKLEEIDVPMNFAAKIVTKSKQNLRNAIMALEACKAHNYPFSEEQPIPVGWEDTVNEISAEILDDPSYSRLFSIRGKLQKLLVDFVHPKLILRKLVEQLLKGIDASLKRELFYWHAYYDKRLPPGTTALLKLEEFVAKFMSIYRKSSSSRQVV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3850 306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 188 IPR027417 -
Sto6g3850 306 Gene3D - 1 141 IPR027417 -
Sto6g3850 306 Gene3D - 203 296 - -
Sto6g3850 306 PANTHER OS02G0704966 PROTEIN 1 305 - -
Sto6g3850 306 SUPERFAMILY post-AAA+ oligomerization domain-like 203 296 IPR008921 GO:0003677|GO:0006260
Sto6g3850 306 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 1 305 - -
Sto6g3850 306 Gene3D - 143 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3850 Sto-Chr6 42963056 42964654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3850 1 297 Core DNA Replication Machinery Family AT5G27740 38.127 5.53e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3850 K10756 - gmx:100795321 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3850 6 42963056 42964654 Sto6g3850 6 42963056 42964654 ECH