Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3797 ATGAGAGTTCCCGTTACATCGTCCCCACACCATTCCCCAAAACCCACCAACAATATTAGCACCATCCGAACCAATCTGATTCCCCATATAACTCCTACCTCCTGCTACGAACCCACTTCCGTTCTCGACCTCTGCCGGAGCCCCAGCCCCGAAAAACCCTCCGCCTCGCTCTCCAAGCCACCAGAACATCAGTCGTCTCTCGACTTGGACGACCATGTGTTGCATAGCCTTGATTGGGATTCCATCATGAAGGACTTGGGTTTACACGACGATTCCGTTGCAACCGTTTTCAAGACTAGTACTCTTCCCCCTTCTCAAGAACCCCCTTTCGATTTCACTCTCTCCGATCTTACTTACATCAATCAAAACCTGGGCTACAATTCTTTTGATCATTTGGTTCACGATTTCAACCAAAGCGGTAATTGGAATAACGGCTTCGATTTCATCGAAGAGCTTATTCGAGCAGCCGATTGCTTCGACACCAATCAACTTCAACTCGCTCACGTGATATTGGAGCGGCTCAATCAACGGCTACGATCCCCTGTTGGAAAACCCCTTCACAGAGCTGCCTTTTATTTCAAAGACGCTCTCCAATCTCTTCTCTCCGGTTCCAACCGGACCCCGCGGATTTCTTCCTTGGTGGAAATAGTTCAAAGCATCCGAGCCTTCAAGGCCTTCTCGGGGATTTCTCCGATTCCTATGTTCTCCATCTTCACCACCAATCAGGCACTCCTCGAGGCCCTTCATGGCTCCTCCTTTATGCACGTCATCGATTTCGACATCGGCCTCGGCATCCAATACGCTTCGCTCATGAAAGAGATTGCCGAGAAGGCGGAGTCCTGTAAGATCAACTCGCCGGTTCTTCGGATCACCGCCGTCGTGCCGGAAGAATACGCTGTGGAGAGCAGATTGATTCGGGAGAACCTGAATCAGTTCGCTCAAGAACTCAGGATTCGAGTTCAGGTGGAGTTCGTGCTGATGCGAACCTTCGAAACGCTGTCGTTGAAGGCCGTGAAGTTCATGGACGGAGAGAAGACCGCTGTTCTTGTATCTCCGACGATCTTCCGCCGTCTCGGATCAACAAAAAGCATCGCGGCGTTTCTAGGGGATATTCGGAGGGTTTCGCCCAGCGTGGTGGTTTTTGTAGACGGTGAAGGGTGGACGGATGCCGCTGCGGCGACGTCGTTTCGTCGGGGTGTGGTGAACAGCCTGGAGTTTTACTCGATGATGTTGGAGTCGTTGGATGCGTCAATGGTGGGGGGAGGAGGGGATTGGGTGAGAAGGATTGAGATGCTTCTGCTGCGGCCGAAGATGTTGGCGGCGGTGGAAGGCGGAGGACGGCGGGTTCCGGCGTGGAGGGAGCTGTTTTACGGCGCGGGAATGAGGGCGGTGCAATTAAGCCAATTCGCGGATTTTCAAGCAGAGTGTTTGTTGGCCAAAGTACAAATCAGGGGCTTCCACGTGGCAAAACGACAGGCAGAGTTGGTGCTATTGTGGAATGAGCGGCCCATGGTTTCCACGTCAGCTTGGCGATGTTAG 1539 0.5263 MRVPVTSSPHHSPKPTNNISTIRTNLIPHITPTSCYEPTSVLDLCRSPSPEKPSASLSKPPEHQSSLDLDDHVLHSLDWDSIMKDLGLHDDSVATVFKTSTLPPSQEPPFDFTLSDLTYINQNLGYNSFDHLVHDFNQSGNWNNGFDFIEELIRAADCFDTNQLQLAHVILERLNQRLRSPVGKPLHRAAFYFKDALQSLLSGSNRTPRISSLVEIVQSIRAFKAFSGISPIPMFSIFTTNQALLEALHGSSFMHVIDFDIGLGIQYASLMKEIAEKAESCKINSPVLRITAVVPEEYAVESRLIRENLNQFAQELRIRVQVEFVLMRTFETLSLKAVKFMDGEKTAVLVSPTIFRRLGSTKSIAAFLGDIRRVSPSVVVFVDGEGWTDAAAATSFRRGVVNSLEFYSMMLESLDASMVGGGGDWVRRIEMLLLRPKMLAAVEGGGRRVPAWRELFYGAGMRAVQLSQFADFQAECLLAKVQIRGFHVAKRQAELVLLWNERPMVSTSAWRC 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3797 512 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 511 IPR005202 -
Sto6g3797 512 PANTHER SCARECROW-LIKE PROTEIN 15 10 511 - -
Sto6g3797 512 Pfam GRAS domain family 149 511 IPR005202 -
Sto6g3797 512 ProSiteProfiles GRAS family profile. 139 511 IPR005202 -
Sto6g3797 512 MobiDBLite consensus disorder prediction 1 21 - -
Sto6g3797 512 MobiDBLite consensus disorder prediction 45 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3797 Sto-Chr6 42621390 42622958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3797 67 511 GRAS Transcription Factor Family AT4G36710 56.067 1.03e-170 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto6g3797 GRAS 1.4e-86 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3797 - - gmx:100807470 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3797 6 42621390 42622958 Sto6g3797 6 42621390 42622958 ECH