Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3796 ATGGAGGATCAGAAACAACATGCAGTTCTGCTCTCAGAAACTGAACTCCTTTTCCGTCTCTCTCTGTCCTATTCCCTCGACAACAGTGACACTTGTGATTTTAAGGATGATTTTGTCTTCAATATCCATCCTACTTTGCTTCTCGACTCTGCCAAAGTCACAATGGGTCTAATCATCGGAGAAGGGCCTCATTCCACTGTGTATGAAGGATGGTATGAATCCAGGGCTGTGGCTGTAAAGGTTATACTCCCATCCACAACATCTGAAGTAAATCGAAAGCTTAAGGAGAAATTTCAAAGGGAGGTTAAGTTGCTCTCTAAGTTAAAGCATCAAAATATTGTGCAGTTTATTGGTGCCTCAGTGGAACCAAGGATGATGATAATCACAGAACTTGTGAGAGGGGGGTCGCTTCAGAAATACTTAAGCGACTTGTATCCAATGCGTTTAGATTTGAAGCAGTCTATAAGTTATGCTCTTGATATTTCTCGAGCTATGGAGGTTTTGCATTCTACTGGCATCATTCACAGAGATCTCAAGCCtgATAATTTACTTCTAACAGAAGACAAACAGCACATTAAAATTGGAGATTTCGGGCTGGCAAGAAAGTTAACATGCAAGGAGATGACTTCTGAGGCTGGTACTTACCGATGGATGGCTCCTGAGTTATTCAGCAAGGATCCACTCCCAAAGGGAGCAAAGAAATGCTATGATCATAAAGCGGATGTGTACAGCTTTGCAATAGTTCTTTGGACTTTGGTCACTAACAGAATCCCTTTTAAAGGAAGGAGCGAACTAATGGCTGCATATGCTTCTGCATTAAACATAAGGCCTAGCTTGGATGAGGTTCCAAGAGATGTGATTCCCCTGGTGGAGTCGTGTTGGGCAGCAGAACCAGAACAGCGACCAGAATTCAAGGACATCACAGCCACTCTTACAACGTTGTTTCACAACTGCTCTCTCACTCCTCGTCAAGCAGTGGGAGAGCCTTCCAGCCCAAGCCCAGTTGTAAGCCCTGACCCAAGCCCATACATTGTGACTGTGGGCTGTTTTTCTGAACTGATCTGGATGGGGACAGGGGAAGAGAGCACACCTAAATCATCTAAACTGTCTTCTACAACTCAGGAGACGCCAACAGCACCTTCATACCCTGATTGGTCCAGCTCTATGCAAGCTTATTATGCTCCAGGAGCAGCTCCTCCTCCATTTTTTGCCTCAACTGTTGCGTCACCAACTCCTCACCCCTATCTATGGGGGAGCCAGCATCCTCTAATTCCGCCATATGGGACTCCCGTTCCATACCCACCCATGTATCCTCCAGGGGGTGTCTATGCTCATCCTAGCATGGCAACAACTCCAAGCTCTGCGCAACAAACTACAGAATTTGAAGGGAAGGGACCTGATGGAAAAGATCGGGCTTCTGCCAAAAAATTGAAGGGAACTCCTACTAACATTGGTTCCAAAGCAGGAGAGAGTGGAAAGGCAGGCTCAGGGTCGGGAAATGATGGAATCTCACAAAGTGCTGAAAGTGGTACGGAGGGTTCATCTGATGCAAGTGAAGAGAATAATAACCAACAGGATTCAACTAGAAACAAGAAAGGAAGCTTTGACCAGATGCTTGTTGAGGGAGCCAATGCACAGAACAGTTCTGGTGGTTCCACTCAAAAGCCTACTGTCTCAATGCCAGCAACTAATCTTAATATTGGAATGGACTTGTGGAATGCATCTGCTGCTGGTGCTGACgctgcaaagatgagacataaCCCATCTGGTGCCTCAGCAGCTGTTGCTCCTTCAACCATAATGGGACGCGAAGTTGCACTTAGTGAACAGTGGATACAAGATGAACGTGAACTAAAAAGACAGAAGAGGAAACAGTCTAACAGAGAATCAGCTAGGAGGTCAAGACTGCGGAAGCAGGCCGAGTGTGAAGAGTTACAGAAGAGGGTGGAGACGCTAGGAAATGAGAATCGAACTCTCAGAGAGGAGCTACAGAGGCTTTCTGAAGAATGCGAGAACCTTACATCAGAAAACAATTCCATCAAGTTTATCGTCTATTACGCATATTCTGGTTTCATTTCTAGATTGAATGTGACATCCTTAAAATTTAGCTCATTCATGTTACAAACTGCTGTTAACAGGAAGAGTTGGAACGGCTGTGTGGGCCAGAAGCAGTTGCTAACCTTGAATAGAACAACCACAGATGCAGTTCTTCAGCTGGACAATACTGCTGGGATGTATCCGATTCACCAGCATCCCTTAACCTACGGCCTGATCGAACAATAG 2283 0.4498 MEDQKQHAVLLSETELLFRLSLSYSLDNSDTCDFKDDFVFNIHPTLLLDSAKVTMGLIIGEGPHSTVYEGWYESRAVAVKVILPSTTSEVNRKLKEKFQREVKLLSKLKHQNIVQFIGASVEPRMMIITELVRGGSLQKYLSDLYPMRLDLKQSISYALDISRAMEVLHSTGIIHRDLKPDNLLLTEDKQHIKIGDFGLARKLTCKEMTSEAGTYRWMAPELFSKDPLPKGAKKCYDHKADVYSFAIVLWTLVTNRIPFKGRSELMAAYASALNIRPSLDEVPRDVIPLVESCWAAEPEQRPEFKDITATLTTLFHNCSLTPRQAVGEPSSPSPVVSPDPSPYIVTVGCFSELIWMGTGEESTPKSSKLSSTTQETPTAPSYPDWSSSMQAYYAPGAAPPPFFASTVASPTPHPYLWGSQHPLIPPYGTPVPYPPMYPPGGVYAHPSMATTPSSAQQTTEFEGKGPDGKDRASAKKLKGTPTNIGSKAGESGKAGSGSGNDGISQSAESGTEGSSDASEENNNQQDSTRNKKGSFDQMLVEGANAQNSSGGSTQKPTVSMPATNLNIGMDLWNASAAGADAAKMRHNPSGASAAVAPSTIMGREVALSEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVETLGNENRTLREELQRLSEECENLTSENNSIKFIVYYAYSGFISRLNVTSLKFSSFMLQTAVNRKSWNGCVGQKQLLTLNRTTTDAVLQLDNTAGMYPIHQHPLTYGLIEQ 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3796 760 Pfam Protein tyrosine and serine/threonine kinase 55 311 IPR001245 GO:0004672|GO:0006468
Sto6g3796 760 MobiDBLite consensus disorder prediction 616 637 - -
Sto6g3796 760 Gene3D - 618 674 - -
Sto6g3796 760 Coils Coil 91 111 - -
Sto6g3796 760 Pfam bZIP transcription factor 615 677 IPR004827 GO:0003700|GO:0006355
Sto6g3796 760 SMART serkin_6 53 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3796 760 MobiDBLite consensus disorder prediction 444 530 - -
Sto6g3796 760 Pfam G-box binding protein MFMR 356 448 IPR012900 -
Sto6g3796 760 SUPERFAMILY Protein kinase-like (PK-like) 54 342 IPR011009 -
Sto6g3796 760 CDD STKc_MAP3K-like 59 311 - -
Sto6g3796 760 MobiDBLite consensus disorder prediction 447 461 - -
Sto6g3796 760 ProSiteProfiles Protein kinase domain profile. 53 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3796 760 MobiDBLite consensus disorder prediction 360 384 - -
Sto6g3796 760 PANTHER G-BOX-BINDING FACTOR 1 356 681 - -
Sto6g3796 760 Gene3D Transferase(Phosphotransferase) domain 1 43 325 - -
Sto6g3796 760 MobiDBLite consensus disorder prediction 497 530 - -
Sto6g3796 760 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 622 637 IPR004827 GO:0003700|GO:0006355
Sto6g3796 760 SUPERFAMILY Leucine zipper domain 618 674 IPR046347 GO:0003700|GO:0006355
Sto6g3796 760 SMART brlzneu 615 679 IPR004827 GO:0003700|GO:0006355
Sto6g3796 760 PANTHER G-BOX-BINDING FACTOR 3-RELATED 356 681 IPR044827 GO:0003700|GO:0006355|GO:0043565
Sto6g3796 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Sto6g3796 760 PRINTS Tyrosine kinase catalytic domain signature 129 142 IPR001245 GO:0004672|GO:0006468
Sto6g3796 760 PRINTS Tyrosine kinase catalytic domain signature 167 185 IPR001245 GO:0004672|GO:0006468
Sto6g3796 760 PRINTS Tyrosine kinase catalytic domain signature 240 262 IPR001245 GO:0004672|GO:0006468
Sto6g3796 760 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Sto6g3796 760 CDD bZIP_plant_GBF1 620 670 IPR045314 GO:0003700|GO:0006355
Sto6g3796 760 Coils Coil 628 676 - -
Sto6g3796 760 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 617 680 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3796 Sto-Chr6 42605536 42615384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3796 36 319 MAP Kinase Kinase Kinase AT5G66710 55.439 9.78e-109 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto6g3796 PK_Tyr_Ser-Thr 6e-55 CL0016
TF bZIP Sto6g3796 PK_Tyr_Ser-Thr 6e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3796 K09060 - gmx:778124 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3796 6 42605536 42615384 Sto6g3796 6 42605536 42615384 ECH