Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3777 ATGAGTGAGATGAATAGAATGGTAGGAGAAGGCAATGCAGAGATGGATTACCAGGTAACGGGATTTCGTGAGGCGGTTGCCAGCTTTGCATATGCATTTGAGGCTGCAACTTCTACATCCAGCGCTGCTCGAGCTAGCTTTCAATGGGGTGGAACCATCTTTGTCTTGATTTTGTTGATCTTAAACCGGTTTGGACGGGACTCCCGCTCTGAAAGTACGCTTTTAGTGTTATATCTCTTCACAAGTTTTCCAGAAGTACTGTTCAAAATTTTAAGGGGACAATTTGGTTGCTGGGTTGCTTTCCTTGCAGTTGTTGCAAACCTGTTTTTTCCTGAAACTTTCCCAGTCCCagTTTCACGTTTTCTGCTATTTGTCATCGCTCCTAATTGGATTGCTCATGGACTTCGAGATAGCTTGGTAGGCGGAGTATTTTGTCTGGTAATAGGCATTCTACTGGTCATAACTGAGATTCGTGGAAATGGGGGATTTGGAAACTGTAGGCCAGTGGAGAAAGGCTTAGGGAATAATGTGAAGGGACAACAACCTTATATTGGTAGAGGCACAACAGCATGTCCTAGAAAGGGCAATTCCAAATCTATTCGAGGTTACACCTGCAACGGCGTTTCTCATAGCTGCCAAACTTACCTCACCTTCAGATCTCAACCTCTTTACAACTCTGTCTCCACAATCTCTGCTTTACTCTCTTCTGACCCTTCACTCCTTTCTCAAATCAACTCTGTCTCTCTGAATGCCACCTTTCAAACAAACCAAATGGTCATTGTTCCTGTGAACTGCTCTTGTGCAGGTGACTATTATCAGTCCAACACTTCCTACACAACCCACAACACAGACACCTATTTCTTGGTTGCTaacaacactttccaaggcctctccacttgtcaagctttgatgGACCAAAACCACATTTCTGGAGATATCTTATCTGGTACTCAATTCACAGTTCCTCTTAGATGTGCTTGTCCCACGAAGAATCAAACTCAGAAAGGTGTCAAGTATCTCTTGAGTTACCTAATAGACTGGGGTGATTCTGTTTCTCTTATTAGTAAGAAATTTGGTGTGCTCACCAATAGCACCCTTGAAGCTAATTCACTTTCTTATGAAGAATCCACCATTTTCCCCTTTACCACACTTCTAGTGCCTCTTCTACATAAACCCAACGTTTCTCAAGTCTCTGtgcctccttcctcttcttcctctcttcctccATCCTCacctccttcctcttcctccggTGGAAGCTCAAAAAAGACGTGGGTTTATGCAGTTGTTGGAGCTGTTGGAGGTGTTGTTTTGATATTAGTTCTTGTGGTCTTCTTTTTCCGCACACGGTACcccaaaagtaaaaagaaagatGATTCTGTAATTTCGTCCAAGAGTTTCGAGGCAATTGAGAAACCAGAAGGGAACAAGATGGAGCAAGGGTGTGAAACGTTGTCAGAGATCATATCTGGAATAGCCCAGTCTTTCAAAGTGTACGGATTTAAGGAACTACAGAGTGCAACGGATAATTTCAGTTCAAGATGTTGGATCAAAGGGTCCGTTTATCGTGGCGTTATTAATGGTGATTTGGCTGCCATTAAAAGAAAGGATGGAGATGTGTCAAAGGAGATAGAAATTCTGAACAAAGTTAACCATTCTAATGTGATACGCCTCTCTGGGGTTAGCTTCAACGAGGGTCATTGGTATCTGGTTTATGAGTATGCTGCTAATGGACCCTTGAGTGATTGGATCTTCTTCAACAATAATGTGGATGGAAAGTTTCTGACTTGGGCACAGAGAATACAGATTGCACTGGATGTGGCAACAGGACTTGACTATCTCCATAGTTTCACTTCTCCTCCTCACATCCACAAGGATCTCAAGAGTGAAAACATTCTTCTGGATAATGATTTCAGAGCCAAGATTACAAACTTAGGCCTTGCAAGGTCTGTTAAAACAGAGGATGACCAATTCCCCATGACGAGGCATATTGTTGGAATAAGAGGTTACATGGCTCCTGAATACTTGGAAAATGGCATAATTTCTACAAAGTTAGATGTATATGCATTTGGGGTTCTGATGCTGGAAATTTTAAGTGGAAAAGAGGTTGCTGCCATTGTTGAAGGAGATAAGACAAATTTGTCAGATGTACTTTCAAGTGGAGAGGAGAAGGTGGGGGATTTTATGGATCCTTCTCTGAAAGGGAATTATCCATTGCAACTTGCTGTGTTTGTAGTTAGAATGATTGATAATTGCATAAAGACAGATCCAGCAAGTCGTCCTGCCATGCATGAAATTGTGCAGTCTCTCTCGGTAACCTTGAACTCTTCATTGACCTCGGAAATGTCAGTGAATGTCTCAGGATACCAGAGCCTTAGCAGGAGCTCTTAA 2391 0.4023 MSEMNRMVGEGNAEMDYQVTGFREAVASFAYAFEAATSTSSAARASFQWGGTIFVLILLILNRFGRDSRSESTLLVLYLFTSFPEVLFKILRGQFGCWVAFLAVVANLFFPETFPVPVSRFLLFVIAPNWIAHGLRDSLVGGVFCLVIGILLVITEIRGNGGFGNCRPVEKGLGNNVKGQQPYIGRGTTACPRKGNSKSIRGYTCNGVSHSCQTYLTFRSQPLYNSVSTISALLSSDPSLLSQINSVSLNATFQTNQMVIVPVNCSCAGDYYQSNTSYTTHNTDTYFLVANNTFQGLSTCQALMDQNHISGDILSGTQFTVPLRCACPTKNQTQKGVKYLLSYLIDWGDSVSLISKKFGVLTNSTLEANSLSYEESTIFPFTTLLVPLLHKPNVSQVSVPPSSSSSLPPSSPPSSSSGGSSKKTWVYAVVGAVGGVVLILVLVVFFFRTRYPKSKKKDDSVISSKSFEAIEKPEGNKMEQGCETLSEIISGIAQSFKVYGFKELQSATDNFSSRCWIKGSVYRGVINGDLAAIKRKDGDVSKEIEILNKVNHSNVIRLSGVSFNEGHWYLVYEYAANGPLSDWIFFNNNVDGKFLTWAQRIQIALDVATGLDYLHSFTSPPHIHKDLKSENILLDNDFRAKITNLGLARSVKTEDDQFPMTRHIVGIRGYMAPEYLENGIISTKLDVYAFGVLMLEILSGKEVAAIVEGDKTNLSDVLSSGEEKVGDFMDPSLKGNYPLQLAVFVVRMIDNCIKTDPASRPAMHEIVQSLSVTLNSSLTSEMSVNVSGYQSLSRSS 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3777 796 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 176 784 - -
Sto6g3777 796 Gene3D Transferase(Phosphotransferase) domain 1 576 788 - -
Sto6g3777 796 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 176 784 - -
Sto6g3777 796 ProSiteProfiles Protein kinase domain profile. 456 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3777 796 Pfam Protein kinase domain 534 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3777 796 SUPERFAMILY Protein kinase-like (PK-like) 495 770 IPR011009 -
Sto6g3777 796 SMART serkin_6 516 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3777 796 ProSiteProfiles LysM domain profile. 341 386 IPR018392 -
Sto6g3777 796 Pfam LysM domain 348 387 IPR018392 -
Sto6g3777 796 Pfam Cold acclimation protein WCOR413 34 176 IPR008892 GO:0016021
Sto6g3777 796 MobiDBLite consensus disorder prediction 399 421 - -
Sto6g3777 796 Gene3D Phosphorylase Kinase; domain 1 484 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3777 Sto-Chr6 42472170 42478490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3777 179 783 Receptor kinase-like Gene Family AT2G23770 45.024 6.74e-170 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sto6g3777 Pkinase 5.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3777 - - gmx:100815842 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3777 6 42472170 42478490 Sto6g3777 6 42472170 42478490 ECH