Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3770 ATGGAAGTGCTTCCGTGTTCTGGTGTTCAATATGCTGCAGAATCTGATTGCCCGCAGCAGAGTTCAGGAACATCTTTTGTATACCAGGGTGAACCTAGCCGTGAAGATAGTGATAGAGTCAAACCGGAGAATGGTCAACTGAATGACTCATTACTTAAAATGGAAGGGCCTCAGATAGAAAAGCAAGGTGAAGGTCAAGATACAGTTGGTGAACCGTCGGTTAATCCAGATTGGCAATGTAGTGGAGTTTCATGTTGTGACTGTCAAGTGGTAGACCAAAAGGAGTCTTCTGGTTTCCATGGTTTTGAGGAGGATGAGATAGATGAACCTTGCTTACCCTTTGTGGATACAATTGAAAGTGAATCACCAAACAACAGTAGGGATGGAGAGTTGCCACTTTCTGAACCTACTTGGCTAAAGGGGGATGAGTCTGTGGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCAGGCTGGCATAAGATGTGCAAGGGCTGACTGGCCCTTATCGACTCTGAAAGCAAAACCAACTCATGACCGGAAGAaatattttgtgatattttttcCACACACAAGGAATTATTCTTGGGCTGATATGATGCTTGTTTGTTCAATCAGTGAATTTCCCCAGCCTATTGCATATAAGACCCATCAGGTAGGATTGAAAATGGTAAAAGATTTGAGTGTTGCCCGACGGTTTATAATGCAAAAGTTAGCTGTTGGCATGCTGAACATCATTGATCAATTTCACTTGGATGCTTTGATTGAAGCTGCTCGTGATGTGATGGTTTGGAAGGATTTTGCTATGGAAGCTTCCCGTTGTAATGGTTATTCTGATCTTGGAAGAATGCTTCTAAAGCTGCAAAATAGCATAATGCAGCACTACATAAATGCTAACTGGTTACAGAATTCTTTTCACTCTTGGATTGATCGATGCCAGAATGCAAGTAGTGCTGAATCAATAGAACTGTTGAAGGAGGAGTTGTTTGATTCTATACTGTGGAATGATGTCAACACTCTCTGGGATGCGCCAGTGCAACCAACATTAGGTTCTGAGTGGAAAACCTGGAAGCAGGAAGTGATGAAATGGTTTTTTACATCTCCTTCCTTATATAGCAGCAAAGACACACAGCAGCAGGCCTCTGATGGCTCCTTCCAAGCAAGCCTCCAAGTCTGTCGAAAAAGGCCCAAGCTTGAAGTTCGTCGGGCAGAGACACAAGCTTTACAAGTGGAAACTAAGGGTTCAGATCACTCTATAACTCTGGATACTGACTTGGGCTTTTTTAATAATCAGGACACATTGAGTACATTGGCAGTTGAGACTTGTAGACAGGAAGATTTTAGGGAGGTGGCTACCCCAACTGATTCACAAAATAATTTAGCCAATAAATGGAATGACATTGTGGTTGAAGCTGCAAATGCTGAGTTATTGCATACCAAATCCGTGGAATCAACACCTATAAATGAAATGGCTGGTGCAAAATCTGTTGAGCTTGGCAGTAAGAATCGACAATGTGTAGCTTATATTGAAGCCAAGGGAAGACAGTGTGTAAGATGGGCAAATGATGGTGATGTTTACTGTTGTGTACATTTGTCCTCCCGTTTTCTAGGCAGCTCAGCAAAAGCTGAAAAACCTGTTTCAGTTGATACTCCTATGTGTGAAGGCACGACTGTTCTTGGTACTAGATGCAAGCATCGGGCCCTGCCTGGCTCTTCATTCTGTAAGAAACACAAGCCCCATGGTGAAGCAGATCACACTTCAAATCTACCTCAGAACTCCCTAAAGAGGAAACATGAAGAAAATGCTGGTTTAGAGAGCATGTTTTGCAAAGATATAGTACTGGTAGATGGTGGAAGTCCTTTGCAAGTGGATCCAGTGTCAGCTGTGGATGCTGACCCCTTCCATGAAAGCAGCAACTTAAATGAGAAACCAACGCAATTTGGAAATGATCAAAATGCAACGGAGGAAGTTCATTGTATTGGCTCGTCTCTCTTTGATGACAAGAACCCCTGTTTGGAAACTCCAAAGCGGTATTTCTTGTATTGTGAAAAGCATCTGCCAAGTTGGCTCAAACGTGCAAGAAATGGGAAGAGTAGAATAATATCAAAAGAAGTGTTCGCAGAACTTTTGAGGGACTGCTTCTCACGGGAGCAGAAAGTAAATCTACATAAAGCATGTGAGATTTTTTACAGGCTATTTAAAAGCATTTTATCCTTAAGAAACCCAGTTCCAAAGGAAGTTCAATTCCAGTGGGCTTTGACTGAAGCTTCTAAAGATACTAATGTTAGAGAATTCTTTGAAAAGTTGGTTCATCGTGAAAAAGAGAGAATCAAAGTGATTTGGGGATTCAATGATGACAAAGATGCATCTATACTCAGGGAAGAACCACCTCAGTTGCCAACCACAGTTAATGATAGCTTTAATCATGAAAATGTCAGTAAATGTAAGATCTGCTCCGCAGAATTTCCTGATGATCAAGCACTTGGCAGCCATTGGATGGAAAATCATAAAAAGGAATCACAATGGCTGTTTAGAGGTTATGCATGTGCTATTTGCCTAGATTCTTTTACTAATAAGAAAGTCTTGGAGGCTCATGTCCAGGAGAGACACCGTGTGCAATTTGTTGAACAGTGCATGCTTCTCCAGTGTATTCCTTGTGGTAGCCATTTTGGAAATACTGATCAGTTATGGCTGCATGTGCTGTCAGTTCATCCTGTGGATTTTAAGGCATCAACGGCTCCTGAGCCGCAAACTTTGTCTACTGGTGAGGACTCTTCTATAAAATTAGAGGTAGAGCAGGGGAATGTAGCCTCTTTGGAGAATAATTCAGAAAACTCAGGTAGTTTGCGAAAGTTCATTTGCAGGTTTTGTGGGTTAAAGTTTGATTTACTACCTGACCTTGGTCGTCATCATCAGGCTGCTCATATGGGCCCTAATTTAGTTAGTAGCCGTCCCTCGAAGAGGGGAGTTCGTTATTATGCATATAGATTAAAATCTGGCAGGCTTAGTCGTCCTAGATTTAAGAAAGGTTTGGCAGCAGCATCATATAGGATCAGAAGTAGAGCTAGTGCTAATTTAAAGAGACGCATTCAAGCAACTAAGTCGCTTGGCATGGGGGGAATAACTATACAACCTCAAGTAACTGAGACAAAAAATATTAGTAATTTGGCAGAATATCAATGCTCTGCTGTTGCTAAGATTTTGTTTTCTGAGATCCAGAAGACTAAACCTCGGCCAAACAATCATGATATTCTATTAATTTCTCGCTCTGCTTGCTGCAAAGTTAGTCTCAAAACCTCACTGGAGGAGAAATACGGAACTCTACCTGAGAAGCTGTATCTGAAGGCTGCAAAACTTTGCAGTGAGCATAATATTCTAGTGAACTGGCACCAGGAAGGGTTTGATTGTCCTAGAGGTTGTAAGACATTGAAGGACCAACCATTACTTTCTCACTTAGCATCTCTTCCTAACGGTTTTGTGAAgcaaaaaaatgtaaatttgcCAGATCCTACAAGTGATGAATGGGACGTGGATGAGTTTCACTACATCATCAATTCTCACCATTTAAAACCAGGGTCCTTGCAAAAGGCTGTAGTCTTATGTGATGACATAAGCTTTGGAAGAGAATCAGTTCCTGTGATTTGTGTAGTAGATCAAGAACTGTGGAACTCTCTTCACATGTCTGGATCTAATGTACATGATATGAATCTTTCTATGCCTTGGGAGAGCTTTACCTATGTAACGAAGCCTGTGCTTGATCAATCCCTTAGTCTTGATTCAGAGAGTCTGCAATTGGGATGTTCCTGCTCATATTCTACATGCAGTCCTGAAACATGTGATCATGTATACCTTTTTGATAATGACTATGATGATGCAAAGGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAATAATTTTGGAGGAAGGTTATCTAGTCTATGAATGCAACCATATGTGCAGGTGTAATAGAATGTGTCCAAACAGAATTTTGCAAAACGGAGTACAAGTTAAATTGGAAGTTTTTAAAACCGAGAAAAAGGGATGGGCAGTACGGGCCGGGGAAGCTATTTTGCGGGGTACATTTGTATGCGAGTATGTTGGAGAGGTTTTAAGTGAGCAGGAGGCTCAAAACAGGCGCCAGAGGTATGACGAAGAAGATTGCAGTCATTTCTATGATATAAATGCTCATATTAATGATATGAGCAGATTGATTGAAGGACAGGTCCCATATGTTATTGATGCTTCTAGATATGGAAATGTTTCAAGGTTTATCAATCACAGCTGCTCGCCCAATCTTGTGAATCACCAAGTTCTTGTTGAAAGCATGGATTGTGAACGTACACACATTGGTCTTTATGCAAGTAGAGATATTGCTTTGGGTGAAGAACTGACATGCGATTATCATTATAAACTTGTGCCTGGGGAAGGATCACCTTGCCTCTGTGGATCTTCAAAGTGTCGGGGACGCCTTCACTGA 4497 0.4132 MEVLPCSGVQYAAESDCPQQSSGTSFVYQGEPSREDSDRVKPENGQLNDSLLKMEGPQIEKQGEGQDTVGEPSVNPDWQCSGVSCCDCQVVDQKESSGFHGFEEDEIDEPCLPFVDTIESESPNNSRDGELPLSEPTWLKGDESVALWVKWRGKWQAGIRCARADWPLSTLKAKPTHDRKKYFVIFFPHTRNYSWADMMLVCSISEFPQPIAYKTHQVGLKMVKDLSVARRFIMQKLAVGMLNIIDQFHLDALIEAARDVMVWKDFAMEASRCNGYSDLGRMLLKLQNSIMQHYINANWLQNSFHSWIDRCQNASSAESIELLKEELFDSILWNDVNTLWDAPVQPTLGSEWKTWKQEVMKWFFTSPSLYSSKDTQQQASDGSFQASLQVCRKRPKLEVRRAETQALQVETKGSDHSITLDTDLGFFNNQDTLSTLAVETCRQEDFREVATPTDSQNNLANKWNDIVVEAANAELLHTKSVESTPINEMAGAKSVELGSKNRQCVAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSAKAEKPVSVDTPMCEGTTVLGTRCKHRALPGSSFCKKHKPHGEADHTSNLPQNSLKRKHEENAGLESMFCKDIVLVDGGSPLQVDPVSAVDADPFHESSNLNEKPTQFGNDQNATEEVHCIGSSLFDDKNPCLETPKRYFLYCEKHLPSWLKRARNGKSRIISKEVFAELLRDCFSREQKVNLHKACEIFYRLFKSILSLRNPVPKEVQFQWALTEASKDTNVREFFEKLVHREKERIKVIWGFNDDKDASILREEPPQLPTTVNDSFNHENVSKCKICSAEFPDDQALGSHWMENHKKESQWLFRGYACAICLDSFTNKKVLEAHVQERHRVQFVEQCMLLQCIPCGSHFGNTDQLWLHVLSVHPVDFKASTAPEPQTLSTGEDSSIKLEVEQGNVASLENNSENSGSLRKFICRFCGLKFDLLPDLGRHHQAAHMGPNLVSSRPSKRGVRYYAYRLKSGRLSRPRFKKGLAAASYRIRSRASANLKRRIQATKSLGMGGITIQPQVTETKNISNLAEYQCSAVAKILFSEIQKTKPRPNNHDILLISRSACCKVSLKTSLEEKYGTLPEKLYLKAAKLCSEHNILVNWHQEGFDCPRGCKTLKDQPLLSHLASLPNGFVKQKNVNLPDPTSDEWDVDEFHYIINSHHLKPGSLQKAVVLCDDISFGRESVPVICVVDQELWNSLHMSGSNVHDMNLSMPWESFTYVTKPVLDQSLSLDSESLQLGCSCSYSTCSPETCDHVYLFDNDYDDAKDIFGKPMRGRFPYDENGRIILEEGYLVYECNHMCRCNRMCPNRILQNGVQVKLEVFKTEKKGWAVRAGEAILRGTFVCEYVGEVLSEQEAQNRRQRYDEEDCSHFYDINAHINDMSRLIEGQVPYVIDASRYGNVSRFINHSCSPNLVNHQVLVESMDCERTHIGLYASRDIALGEELTCDYHYKLVPGEGSPCLCGSSKCRGRLH 1498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3770 1498 ProSiteProfiles Zinc finger C2H2 type domain profile. 951 979 IPR013087 -
Sto6g3770 1498 Pfam Zinc finger C2H2-type, 3 repeats 848 975 IPR040689 -
Sto6g3770 1498 MobiDBLite consensus disorder prediction 14 31 - -
Sto6g3770 1498 Pfam SET domain 1354 1474 IPR001214 GO:0005515
Sto6g3770 1498 ProSiteProfiles Zinc finger C2H2 type domain profile. 846 869 IPR013087 -
Sto6g3770 1498 Gene3D Classic Zinc Finger 807 878 - -
Sto6g3770 1498 ProSitePatterns Zinc finger C2H2 type domain signature. 882 903 IPR013087 -
Sto6g3770 1498 ProSitePatterns Zinc finger C2H2 type domain signature. 814 835 IPR013087 -
Sto6g3770 1498 Pfam Pre-SET motif 1204 1335 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto6g3770 1498 ProSitePatterns Zinc finger C2H2 type domain signature. 953 974 IPR013087 -
Sto6g3770 1498 ProSiteProfiles SET domain profile. 1343 1475 IPR001214 GO:0005515
Sto6g3770 1498 ProSiteProfiles Pre-SET domain profile. 1264 1340 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto6g3770 1498 SMART c2h2final6 951 974 IPR013087 -
Sto6g3770 1498 SMART c2h2final6 812 835 IPR013087 -
Sto6g3770 1498 SMART c2h2final6 880 903 IPR013087 -
Sto6g3770 1498 SMART c2h2final6 846 869 IPR013087 -
Sto6g3770 1498 MobiDBLite consensus disorder prediction 14 73 - -
Sto6g3770 1498 Gene3D SET domain 1181 1479 IPR046341 -
Sto6g3770 1498 SUPERFAMILY SET domain 1192 1488 IPR046341 -
Sto6g3770 1498 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1498 - -
Sto6g3770 1498 ProSitePatterns Zinc finger C2H2 type domain signature. 848 869 IPR013087 -
Sto6g3770 1498 SMART set_7 1343 1481 IPR001214 GO:0005515
Sto6g3770 1498 SMART preset_2 1200 1327 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Sto6g3770 1498 MobiDBLite consensus disorder prediction 573 596 - -
Sto6g3770 1498 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1498 - -
Sto6g3770 1498 ProSiteProfiles Post-SET domain profile. 1482 1498 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3770 Sto-Chr6 42414812 42423975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3770 128 1497 C2H2 Transcription Factor Family AT2G23740 52.199 0.0 1404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto6g3770 Pre-SET 2.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3770 - - gmx:100786757 2336.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3770 6 42414812 42423975 Sto6g3770 6 42414812 42423975 ECH