Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3730 TTGGAACCACTTCGTCATGAAGATGCATTAACACTTTTCAGTTACTTTGCTCTCCCAAAAGACAACAACAGCTCATATGTTCCAGATGAAAGTCTAATCCAAGAGGTTGTGAAAGCTTGTAGGGGTTCGCCGTTGGTTATTCAAGTTATAGGTAGATCACTCTGCCAGCAACCTTATGATGTGTGGCAAAAGATGGTAAATTCATGGTCGCAAGGTCATTCTATTCTTGATTTGGATACAAATTTGCTTAATTTCCTACAAAAGGGCTTTGATGTTTTGGTAGACAAGTCCAATGTCAAGGAGTGCTTCATGGACCTAGGGTTATTTCCTGAAGACCAAAAAATTCCTGTTACTGCTCTCATTGATATGTGGACTGTACTGTATGACCTAGATGATGAGGGCGTAGAAGCAATGAACATTATCTATAGATTAACCTCACGGAATTTGGCAAATCTTCTTATCACAAGGAAAGTTGAAAGTAACACAGACAATTTCTACAACAACCACTTCATCATGCAGCATGACCTTCTCAGAGAACTTGCAATTTATCAAAGCAGCCAGGAACCATTTGAACAGAGAAAAAGACTGATTGTTGAcataaatgaaaataatcacCGGTGGTCTCTAAAAGAGAAGCAGCAAGGTGTTATTGCCTGCATCTCCTCAGCACTCCTTAAATGCTGTGCTAAACTGAAGCAGCAACATGTCATTGCACGCACACTATCTATATCCACTGATGAGACATTCACTTCAGATTTTTGCGACATGGAACCAACTGAAACTAAGGTAATGATTTTGAATGTTCGTACTAAGGAGTATTCATTGCCAGCTTTCATAGAGAAAATGAGAAAGCTAATGGTTCTACTACTCACAAATTATGGTTTCCATACTACTGAATTGAAAAACTTTCACCTACTTGGCTCTTTACCCAACCTGAAAAGAATTAGATTGGAGAAGGTTTCTGTTCCCTCCCTTGGCACATTGAAGAACCTGCGAAAACTATCCCTTTATATGTGTAACACAAGTGAGGCTTTTGAAGAAAGCACCATGCCAATTTCAGATGCATTACCAAATCTAGTGGAATTGAACATTGACTATTGCAAAGATATCGTGAAATTGCCTAATGGGATCTGTGGTATTAAGCCCCTGAAGAAGTTGAGTATTTCTAACTGCCATAAATTTTCTGCTCTGCCTCAAGACATTGGAAATCTGGACAATTTGGAAGTGATGAGACTTAATTCCTGTACTGATTTAGAAGTTATACCAGACTCAATTGGAAAACTTAACAAGCTAAGGTTTCTTGACATCTCAAACTGCATAAGCCTTAGAAATTTACCGGAGGACATTGGTAACTTGAAAAATCTAGGGGTGGTGTATATGACAGGTTGCTCAAGATGCGAATTGCCAATGTCAGTCGCTTATCTTGAGCATTTAAAGAGTGTTACATGCGATGAAGAGACTGCTGCTTCATGGGAGGTTCTCAAACCTATGCTTCCCAACCTAAGGATCGTTGTACCACAAGTGGATGTTAACTTAAATTGGCTTCTTGGGACAAGAGATTCTTAG 1566 0.3889 LEPLRHEDALTLFSYFALPKDNNSSYVPDESLIQEVVKACRGSPLVIQVIGRSLCQQPYDVWQKMVNSWSQGHSILDLDTNLLNFLQKGFDVLVDKSNVKECFMDLGLFPEDQKIPVTALIDMWTVLYDLDDEGVEAMNIIYRLTSRNLANLLITRKVESNTDNFYNNHFIMQHDLLRELAIYQSSQEPFEQRKRLIVDINENNHRWSLKEKQQGVIACISSALLKCCAKLKQQHVIARTLSISTDETFTSDFCDMEPTETKVMILNVRTKEYSLPAFIEKMRKLMVLLLTNYGFHTTELKNFHLLGSLPNLKRIRLEKVSVPSLGTLKNLRKLSLYMCNTSEAFEESTMPISDALPNLVELNIDYCKDIVKLPNGICGIKPLKKLSISNCHKFSALPQDIGNLDNLEVMRLNSCTDLEVIPDSIGKLNKLRFLDISNCISLRNLPEDIGNLKNLGVVYMTGCSRCELPMSVAYLEHLKSVTCDEETAASWEVLKPMLPNLRIVVPQVDVNLNWLLGTRDS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3730 521 PRINTS Disease resistance protein signature 40 54 - -
Sto6g3730 521 PRINTS Disease resistance protein signature 426 442 - -
Sto6g3730 521 Pfam NB-ARC domain 3 68 IPR002182 GO:0043531
Sto6g3730 521 Gene3D Ribonuclease Inhibitor 226 498 IPR032675 -
Sto6g3730 521 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 506 IPR039203 GO:0050832
Sto6g3730 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 106 IPR027417 -
Sto6g3730 521 Gene3D - 4 82 IPR042197 -
Sto6g3730 521 Gene3D - 90 181 IPR036388 -
Sto6g3730 521 SUPERFAMILY RNI-like 272 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3730 Sto-Chr6 42211284 42213239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3730 308 478 WRKY Transcription Factor Family AT4G12020 28.718 4.88e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3730 - - gmx:100808032 637.106