Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3728 ATGGCAAGTTTGGTAGGAGGAGCAGCCATTGGAGCTGGGTTTCAACAGGCGTTGACATGGGGTTTAGAAATCATCAATATGGGTCTTAACTACTCGAGCACCCTCCAAACCAACATAGATACTTTGGAGGCTTTGGGTCCTGTGGTACAAGACATCGTATGGTACAACCAGGAATTGGATCGTCCAAGAGAAGAAGTGGAACCGCTGATTAGGGAAATGCGAGCGGGGGAAGAGCTTATTCGCAGGTACTCCAATGTCTCCCGCCGGAATTTCCTTTGTTTTCCTTGTTACCAGAAGAAGCTTCTAGCCGTGGACGAATCACTGAGGAGGACCTTAAGTGTGAATGTACAGGTCCAGATGGCGAGGGATGTGAAGGAGATCTTAAAGAAGGTGACGGATAGTCTTATGATTCTCTCACAGCAATTTGGTCACATTAATTACGGTATGGGCACTGCTCTGTATGGGGCTCCTGAAAACCCAGAATTTACTGTTGGATTGGAAATGCTTTTGGAACAGTTGAAGATTGAGGTGCTCAAGGATGGGCTTTCCTTCTTAAATTTGACTGGTTTTGGAGGATCCGGGAAGACCACTTTGGCTAAAAAGCTGTGTTGGGAACCTCAAGTCTTAGGTAAATTCAACCGAAATAATATCTTCTTTGCAACCTTTTCAAAATCGCCCAACTTGAAGATCATTGTGGAGAGACTATTTGAACACTTTGAGCAACCCAAGCCTGAATTTCAAAGCAATGAAGACCCAGGTTACAAATTGCGCATTCTGCTGAACCAAGTTGGAGCAACTCATCCTATATTGTTGGTATTGGATGATGTTTGGCCTGGCTCTGAAAGCCTTGTCGAAAAGTTTAAGGTTCAAATTTCAAACCTTAAAATTTTGGTGACTTCAAGGGTTGCACTTAACTTGGAGAGTCGCATTACATTCCAATTGGATCCACTTTCTCTTGAGAACTCGGTTACCCTTTTCCGTCACTTTGCTCAACTAGAAGACACTACTTCATGCCCTCCTAATGATCTTGTCCACAAGGTAGTGAAATGTTGTAGGGGTTTACCATTGGCCCTTCAGTTGATTGGTGGTAAACTTCGTCGGAAGCCTATTGAGTTCTGGCAAAAGATGGTGAAGGAATTATCACAAGGTCATTCCATTATTCATTCTGATAATGATGTGCTTGCTTTCCTCCAAAAATGCTTGGATGTTATGGAAGATAAGTCTACTGTTCAGGAATGTTTCATGGATCTAGGTCTATTTCCTGAAGATCAGATGATCCCCGTTTCTGCCCTCTTTGATATCTGGACAGAACTGCACAAATTAGATGAAGAATTCTATGCAATGCCATATATCTACGAATTAACCACCAAGAATTTATGCAATGTCGTAGTTACAAGGAAATTGGGTAGTGATGCAGACAACTACTACAATAACCACTTCCTCACACAGCATGACATCCTCAGAGATCTAGCCATCCATCAAAGCAACAAGAAGCCATTTGAACAGAGGAAAAACCTGATTATTGATATAACTGGAGACAATCATCCTGGATTGTGGTCAGAACCGAAGCAGCAAGGGATCATTGCACGCGTATTTCTTAAAGGAATTATCAAGCAGAAGCAACAACATGTTGCTGCCCGCTCATTGTCTATATCATCTGGTTCCAATTCAAAATGGTGGAGTATGAAACCAGATAAAGCTGAGGTTCTAGTCTTAAATCTTTGGAGTAACAATTACATCTTACCTGGTTTCATCAAGAGTATGAAGAAACTCAAAGTTCTGATTCTCACAAACTATAGTTTCCACCCATCTCAATTAGACAGTTTTGAGCTACTTGGTTCTCTATCCAATCTAAAAAGGATTAGATTGCAGAGGGTTTGTGTCCCTTCCCTTTGCAAATTGAAGAACTTGAGAAAATTGTCCCTCTATATGTGTTATACGAGTCAGGCTTTTGGAGGAGGTACCATCAACATTAAGGATGCACTACCAAATCTAGTCGATATGAGCATTGACTATTGCAATGATCTAGTGGCGTTACCTACCGGGTTCTGTGAGATTACTACCTTGGAGAAGCTTAGCATCACTAATTGCCACAAGTTTTCTGCGCTGCCACAAGATATTGGAAATATGGAGAATTTGCGAGTTCTCAGGCTTAATTCATGTACTGATTTGTTGGACATACCTGATTCTATCAGAGGGCTTCAAATGCTAAGTCTTCTTGACATCTCATACTGCATAAGCCTTGGAAGATTACCAAAGGACATTGGTGAGTTGAGAAATCTATCAAAACTCTACATGATGGGTTGTTCGTCATTGTCTGAATTTCCTGACTGCACAAAGCTTGAGAAGCTGGAGAAGCTGATATGCGATGAAGAAATAGCCACTTTATGCAAAGCATATTTCGATCCCACAGGTTCCAGATCAATCATAGAGGTCGCCAAAGTAGATCATGACTTAACTTGGCTTGTTGGATCTAGCCGTTGA 2484 0.4171 MASLVGGAAIGAGFQQALTWGLEIINMGLNYSSTLQTNIDTLEALGPVVQDIVWYNQELDRPREEVEPLIREMRAGEELIRRYSNVSRRNFLCFPCYQKKLLAVDESLRRTLSVNVQVQMARDVKEILKKVTDSLMILSQQFGHINYGMGTALYGAPENPEFTVGLEMLLEQLKIEVLKDGLSFLNLTGFGGSGKTTLAKKLCWEPQVLGKFNRNNIFFATFSKSPNLKIIVERLFEHFEQPKPEFQSNEDPGYKLRILLNQVGATHPILLVLDDVWPGSESLVEKFKVQISNLKILVTSRVALNLESRITFQLDPLSLENSVTLFRHFAQLEDTTSCPPNDLVHKVVKCCRGLPLALQLIGGKLRRKPIEFWQKMVKELSQGHSIIHSDNDVLAFLQKCLDVMEDKSTVQECFMDLGLFPEDQMIPVSALFDIWTELHKLDEEFYAMPYIYELTTKNLCNVVVTRKLGSDADNYYNNHFLTQHDILRDLAIHQSNKKPFEQRKNLIIDITGDNHPGLWSEPKQQGIIARVFLKGIIKQKQQHVAARSLSISSGSNSKWWSMKPDKAEVLVLNLWSNNYILPGFIKSMKKLKVLILTNYSFHPSQLDSFELLGSLSNLKRIRLQRVCVPSLCKLKNLRKLSLYMCYTSQAFGGGTINIKDALPNLVDMSIDYCNDLVALPTGFCEITTLEKLSITNCHKFSALPQDIGNMENLRVLRLNSCTDLLDIPDSIRGLQMLSLLDISYCISLGRLPKDIGELRNLSKLYMMGCSSLSEFPDCTKLEKLEKLICDEEIATLCKAYFDPTGSRSIIEVAKVDHDLTWLVGSSR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3728 827 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 801 IPR039203 GO:0050832
Sto6g3728 827 Gene3D - 397 494 IPR036388 -
Sto6g3728 827 Gene3D - 317 393 IPR042197 -
Sto6g3728 827 Gene3D - 152 310 IPR027417 -
Sto6g3728 827 Gene3D Ribonuclease Inhibitor 537 798 IPR032675 -
Sto6g3728 827 PRINTS Disease resistance protein signature 184 199 - -
Sto6g3728 827 PRINTS Disease resistance protein signature 263 277 - -
Sto6g3728 827 PRINTS Disease resistance protein signature 351 365 - -
Sto6g3728 827 PRINTS Disease resistance protein signature 708 724 - -
Sto6g3728 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 417 IPR027417 -
Sto6g3728 827 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 133 IPR008808 -
Sto6g3728 827 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Sto6g3728 827 Pfam NB-ARC domain 171 400 IPR002182 GO:0043531
Sto6g3728 827 SUPERFAMILY L domain-like 564 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3728 Sto-Chr6 42195619 42198476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3728 614 783 WRKY Transcription Factor Family AT4G12020 29.310 4.94e-10 61.6