Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3727 ATGGATCAGTCGCCGATGACCATGGGACCAAGCATGGATATGCCAATTATGCACGATAGCGACCGCTACGATTTCGTCGACAAAATTGGGTCCGGGAATTTCGGGGTGGCTAGGCTTATGAGAGACAAGCAGACCAAAGAGCTTGTCGCTGTGAAGTATATCGAACGCGGGGATAAGATTGATGAAAATGTTAAGAGAGAAATTATTAATCACCGGTCCTTGAGACACCCTAATATTGTTCGGTTCAAAGAGGTCATTTTAACACCTACTCATCTGGCCATTGTCATGGAATACGCATCTGGAGGAGAACTATTTGAGAGAATCTGCAATGCAGGGCGTTTTCCTGAGGATgagGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGCCATGCTATGCAAGTATGCCACCGGGACCTGAAGTTGGAAAACACATTACTAGATGGAAGTCCAGCACCTCGTTTGAAGATATGTGATTTTGGATACTCCAAGTCTTCAGTGCTTCATTCACAACCGAAGTCAACTGTGGGAACTCCTGCATATATTGCACCGGAAGTCTTGCTGAGGCAGGAGTATGATGGCAAGATCGCAGATGTCTGGTCATGTGGAGTAACCTTGTATGTGATGCTAGTGGGATCATATCCTTTTGAAGATCCTAATGAACCAAAGGATTTCCGAAAGACCATACAGAGAATCACCGTTCCTGAAATCTGGAACCACGAATGGTTTCTGAAGAATCTCCCTGCAGATCTAATGGATGAGAAGATACTGGGTAACCAATTTGAAGAGCCAGACCAGCCCATGCAGAGCATCGACATGATCATGCAGATAATTTCAGAAGCTACTATACCAGCTGCTGGGACCTATTCTTTGGACCAGTTTATGGCAGACATGGATGGGGATGATGATGGCATGGATGATTTAGAGTCTGACTCTGAGCTTGATATAGACAGCAGTGGAGAGATAGTTTATGCCATGTGA 990 0.4485 MDQSPMTMGPSMDMPIMHDSDRYDFVDKIGSGNFGVARLMRDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFPEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGSYPFEDPNEPKDFRKTIQRITVPEIWNHEWFLKNLPADLMDEKILGNQFEEPDQPMQSIDMIMQIISEATIPAAGTYSLDQFMADMDGDDDGMDDLESDSELDIDSSGEIVYAM 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3727 329 ProSiteProfiles Protein kinase domain profile. 23 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3727 329 PANTHER SERINE/THREONINE KINASE 233 324 - -
Sto6g3727 329 PANTHER SERINE/THREONINE KINASE 14 231 - -
Sto6g3727 329 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Sto6g3727 329 Gene3D Transferase(Phosphotransferase) domain 1 99 280 - -
Sto6g3727 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Sto6g3727 329 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 14 231 - -
Sto6g3727 329 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 233 324 - -
Sto6g3727 329 Pfam Protein kinase domain 23 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3727 329 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Sto6g3727 329 SMART serkin_6 23 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3727 329 SUPERFAMILY Protein kinase-like (PK-like) 21 276 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3727 Sto-Chr6 42190977 42194771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3727 16 256 CBL-interacting serine-threonine protein kinases AT4G24400 38.849 6.84e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Sto6g3727 Pkinase 2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3727 K14498 - gmx:100806949 562.762