Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3724 atggaattgagcttggatttgagtttgtCCTTTGTTCCCAAAACTATCTCTGAGTTCCTCGGTGAGGTTTCCAGAAGCAGACACAAGTACGAGAAATTGACGATGCTTGACGACTTTGTGAAAAGattggaagaagaaatgaagaagatcGAGGCCTTTAAACGCGAGCTTCCTCTCTGCATGCTCCTTGTAAACGACGCTATAACGAGGTTGAAGGAGGAAAAAGTGCGGTGTGTGGAAATGCAAGATCGACTCGAGGTTGAAGAATTCATGCCACTGAAAGCGAATTCTGGAGAAAATGGAGAATTGAGTATGGAAAAGGATAGTTGTGACAAGAAGAACTGGATGAGCTCTGCTCAACTGTGGAGCACTGAGAGCAAATTGAGAAGTGAAGATGATCGGTCTGTGCCGGAGAACCCTATTCAGTCACGGAACCTGAAAAACAGGGGAGGGGCATTTTTACCCTTTAATGGAAATTTGTGTATGCCAAAGCCAGTGACGAAAGAAGACAAGGAAATTTCACAAGTTCCTAGCCTTACTTTGATGACACCAGCGTCTGAATTAAATCATCACAATTCTAAAACTGGCATCAGAAATAGTTCGGCTTCGTCTTTTCTCGTACAGGGGGGCCAACCTCAGCCGCAGCATTTGCAACAGAATCCTAGGAAACAGCGGCGGTGCTGGTCGCCGGAGCTTCACCGGCGTTTCGTTGACGCTCTTCAACATCTGGGAGGAGCCCAAGTGGCTACTCCTAAACAGATCAGAGAATTAATGCAGGTGGAAGGCCTCACAAATGATGAAGTGAAAAGCCATTTGCAAAAGTATAGGCTTCATGTTAGAAGACATCCAGCTTCGTCAATTGAGCATGGAAATGGGTTATGGATGGTGGAAGATCAATGTGGAGAAAAATCAAAGGTGAGCTTATCACAGTCTGTTTCTCCGCAAGGTCCTCTTCTGCTAGGAGGTTCTGCCAAGGGACACTCCAGCTCTGGAGATGGCGAAGAAGATGAGAGATCAGATTGCCATAGTTGGAAAGGTGGAGATTCCGTATTGTCATAA 1059 0.4381 MELSLDLSLSFVPKTISEFLGEVSRSRHKYEKLTMLDDFVKRLEEEMKKIEAFKRELPLCMLLVNDAITRLKEEKVRCVEMQDRLEVEEFMPLKANSGENGELSMEKDSCDKKNWMSSAQLWSTESKLRSEDDRSVPENPIQSRNLKNRGGAFLPFNGNLCMPKPVTKEDKEISQVPSLTLMTPASELNHHNSKTGIRNSSASSFLVQGGQPQPQHLQQNPRKQRRCWSPELHRRFVDALQHLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRHPASSIEHGNGLWMVEDQCGEKSKVSLSQSVSPQGPLLLGGSAKGHSSSGDGEEDERSDCHSWKGGDSVLS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3724 352 MobiDBLite consensus disorder prediction 305 352 - -
Sto6g3724 352 Pfam Myb-like DNA-binding domain 225 276 IPR001005 -
Sto6g3724 352 MobiDBLite consensus disorder prediction 329 344 - -
Sto6g3724 352 SUPERFAMILY Homeodomain-like 221 281 IPR009057 -
Sto6g3724 352 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 348 IPR044787 GO:0003700|GO:0006355
Sto6g3724 352 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 223 278 IPR006447 GO:0003677
Sto6g3724 352 Coils Coil 36 56 - -
Sto6g3724 352 MobiDBLite consensus disorder prediction 204 225 - -
Sto6g3724 352 MobiDBLite consensus disorder prediction 124 149 - -
Sto6g3724 352 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 348 - -
Sto6g3724 352 Gene3D - 222 279 - -
Sto6g3724 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 220 280 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3724 Sto-Chr6 42174471 42175989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3724 1 273 G2-like Transcription Factor Family AT4G37180 45.907 2.56e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto6g3724 Myb_DNA-binding 3.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3724 - - zju:107424698 394.045