Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3694 ATGGATGTGGGCATAGTGAAAACTTCAGAAGGTCGTGAAAGCAGCAGCATGGACATGCTTTCAATGATGATGCAAATGGAGAAGCTTCCCGAAGATTTCTATGAACCTAattttgttgacaacatcactAGTAGTCCTCCTACTAATTACCCAGAAACAGAGTTCTCCAATCTCCCCATACACCACCTTCCCTATCCCAATGTGTCTCCTAATTTTGTTAATCCCATTCCACCACCAATGTCACCACTTGTTCAACCCCAACCCAGAAatcataacaacaacaacaataataataataatacaagtaGTTCCATATTTGCATCATCGGAGAAGAGGAATTCAAACATGGCAGCGATGAGAGAGATGATATTCAGAATAGCAGTGATGCAACCCATACACATAGACCCGGAATCGGTGAAGCCACCGAAGCGGAGGAACGTGAAGATCTCGAAGGACCCTCAGAGCGTGGCGGCGAGGCACAGAAGGGAAAGGATAAGCGAGAGAATCAGAATTCTGCAGAGACTGGTTCCTGgtgggaccaaaatggacaccGCTTCTATGCTGGATGAAGCCATACATTACGTCAAGTTCTTGAAGAAACAAGTCCAGATTCTTGAACAAGCAGgggctactactactactactactactaggCCTCCTCTTTCTCTTGCTTTCTCTCCTAATTCCACTAATAATGTCAACTACTCTGCTTTCATTAAGCCTTGTAAATCTCACTGA 738 0.3862 MDVGIVKTSEGRESSSMDMLSMMMQMEKLPEDFYEPNFVDNITSSPPTNYPETEFSNLPIHHLPYPNVSPNFVNPIPPPMSPLVQPQPRNHNNNNNNNNNTSSSIFASSEKRNSNMAAMREMIFRIAVMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQILEQAGATTTTTTTRPPLSLAFSPNSTNNVNYSAFIKPCKSH 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3694 245 MobiDBLite consensus disorder prediction 78 110 - -
Sto6g3694 245 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 1 242 - -
Sto6g3694 245 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 208 IPR036638 GO:0046983
Sto6g3694 245 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 242 IPR045843 GO:0003700|GO:0006355
Sto6g3694 245 SMART finulus 155 204 IPR011598 GO:0046983
Sto6g3694 245 CDD bHLH_AtIND_like 150 206 - -
Sto6g3694 245 MobiDBLite consensus disorder prediction 86 110 - -
Sto6g3694 245 Pfam Helix-loop-helix DNA-binding domain 159 198 IPR011598 GO:0046983
Sto6g3694 245 Gene3D - 147 217 IPR036638 GO:0046983
Sto6g3694 245 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3694 Sto-Chr6 41943814 41945206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3694 13 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 57.619 3.32e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto6g3694 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3694 - - gmx:100796649 228.409