Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3689 ATGCCTGATCCTTCCACTGCCGCAACGATGAACGACCAGCTCTCCAGGCCCACCTCAATCTTCGGACTCCGTCTCTGGGTTATTCTAGGGGTTTGTGTCGGAGCCGCCATTGTGCTACTTCTCTTCCTCATCTCTCTCTGGCTCGCCTCCAAGCGCTCCAAGACCAACTCTTCCCCCTCCATCCCAGTCGTCTCCAAAGAGATCCAAGAGATTAGAATCGACCAACTCGATTCCCACCCAAGCGGGACCCGAACCCAGGTCGACCCGTTTCCCGAACCCGACCCAATTCCTGGGATGGAACGCCAGGCTTTGCTGCCGACATCGGAAGAGGATAACACAGTGGGGTACAATAGAATTCAATTTGAGATTGGGAAGAATCATAGAATCTCATACCCTGAACGTGCTCTAGCTAGGTCGTCTTCACATGGAAGTGGGGAGGCTCGACCTGCCGATCAGGTGCCCACGGTGATTCCTGAAGTTTCGCATTTGGGTTGGGGCCATTGGTATACACTTAGGGAGCTTGAGGATGCGACGAATGGGTTCGCGGATGAGAATGTAATTGGTGAAGGCGGCTATGGAATTGTTTACCATGGCATACTGAAGGACAACACTAATGTTGCAGTTAAAAATTTGCTCAATAATAGGGGACAAGCCGAGAAAGAGTTCAAGGTTGAAGTGGAAGCTATAGGACGAGTTCGGCATAAGAATTTAGTGAGGTTGCTGGGGTATTGTGCTGAAGGAGCTCATAGAATGCTTGTTTATGAGTACGTTGACAATGGGAACTTAGAGCAGTGGTTGCATGGGGATGTTGGGCCTTGCAGTCCTCTTACTTGGGAAATTCGAATGAACATTATTCTGGGAACAGCAAAAGGGTTGACTTATCTTCATGAGGGTCTGGAACCAAAGGTTGTTCATCGTGATATTAAATCAAGCAACATTCTGATTGACAAGCAGTGGAATTCGAAGGTGTCAGACTTTGGGCTTGCCAAACTCCTTGGTTCTGAGAGCAGCTACATCACAACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAATATGCAAGTACTGGAATGTTGAATGAACGAAGCGATGTGTATAGTTTTGGAATTCTTATAATGGAAATAATTACAGGCAGAAATCCAGTTGATTATAGTCGACCTCCAGAAGAGGTGAATTTAGTTGACTGGCTGAAGAAGATGGTTAGTAACAGGAATGCAGTAGGAGTGTTGGATCCCAAGCTTCCTGAGAAACCAACTTCAAGGGCACTAAAGCGAGCCCTTCTTGTAGCCTTACGCTGCACTGACCCTAATGCACAGAAACGGCCTAAAATGGGCCATGTAATACATATGCTTGAAGCTGAGGATTCCCCTCACAAAGAGGATCGTAGAGCTAAAAGGGAAGCAGTAGATTCAGCTAATGATGAAGCAGAGGATGGATTAAAAGAGAAGGGGGCATCTGTGTCTGGTGATGGTAAGTTTGAAAGCGAGATGCAAGCCAGTGAGACAAGGTGA 1515 0.4746 MPDPSTAATMNDQLSRPTSIFGLRLWVILGVCVGAAIVLLLFLISLWLASKRSKTNSSPSIPVVSKEIQEIRIDQLDSHPSGTRTQVDPFPEPDPIPGMERQALLPTSEEDNTVGYNRIQFEIGKNHRISYPERALARSSSHGSGEARPADQVPTVIPEVSHLGWGHWYTLRELEDATNGFADENVIGEGGYGIVYHGILKDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYSRPPEEVNLVDWLKKMVSNRNAVGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPHKEDRRAKREAVDSANDEAEDGLKEKGASVSGDGKFESEMQASETR 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3689 504 Coils Coil 201 221 - -
Sto6g3689 504 SMART serkin_6 181 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3689 504 Gene3D Phosphorylase Kinase; domain 1 160 256 - -
Sto6g3689 504 PANTHER OS01G0323000 PROTEIN 6 499 - -
Sto6g3689 504 MobiDBLite consensus disorder prediction 452 504 - -
Sto6g3689 504 PANTHER RECEPTOR-LIKE KINASE PLANT 6 499 - -
Sto6g3689 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Sto6g3689 504 SUPERFAMILY Protein kinase-like (PK-like) 157 453 IPR011009 -
Sto6g3689 504 ProSiteProfiles Protein kinase domain profile. 181 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3689 504 CDD STKc_IRAK 187 453 - -
Sto6g3689 504 Pfam Protein kinase domain 182 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3689 504 Gene3D Transferase(Phosphotransferase) domain 1 257 480 - -
Sto6g3689 504 MobiDBLite consensus disorder prediction 74 95 - -
Sto6g3689 504 MobiDBLite consensus disorder prediction 452 490 - -
Sto6g3689 504 ProSitePatterns Protein kinases ATP-binding region signature. 187 209 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3689 Sto-Chr6 41916797 41918983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3689 158 455 Trihelix Transcription Factor Family AT1G70460 46.535 5.98e-88 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Sto6g3689 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3689 - - gmx:100797440 806.208