Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3681 TTGCAGACAAAGATAGTGCAAGACATGAGTCCTACTCTTAAGGATGTATTATTGGTTATTGATTCTTTGAAAGAACACATAGCTGCTGAGCGGTGCATTTCCGTAAAGAAAAGAATTGAAGACAATAGACAGAAGCTGGTAGGTGTCACAAACCATATTTGTAAATTATCAATGGAAAGAAAAACCTGTGGCATCACTGGTACTAATGGAAGTCTGGACCTgctaacaaagaggcaacaaGATGCAATTGATATGCACAATGGTATTCATGCAAGTAATGGAGATAGGGAGAGCAACGGTTTCCAGGAAGAAAGCCACAGTTCTACAGCAGTTCTTCTGGGATCTAATGTTGCTGTAAAGAATGCTGTCCGCCCAGTCAAGCTTccagaagtaaaaagattaCCACCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACAGAAGATCAGTCAGTAGTAGGTCGAAGGAGAATTTATTATGATCAAAACGGTGGAGAAGCACTTATTTGCAGTGACAGTGAGGAGGAAATAattgaggaagaagaggaaaaaaGGGATTTTGTAGAATCTGAAGATTATATACTTCGCATGACTGTCAAAGAATTTGGTTTGTCTGATCAAGTTCTGGAGTCATTGGCTCAGTGTTTCTCAAGAAACACTAGTGAACTGAAGGCAAGATATGAAGTTATTAGTGATGAAGAAAAAGCTATTGGGGTTTCCAAGAATGGGGATACTGAAGATAATTCACAAGTTGAAAATTCTTTTCTGGAAAAAGATCTTGAAGCAGCTCTTGATTCTTTTGACAACCTTTTCTGCCGAAGATGTCTTGTTTTCGATTGCAGATTGCATGGATGTTCTCAGGATCTTGTCTTTCCTGCTGACAAACAACCTGTGTGGAATCCCCCGGATGCTGAGAATACACCATGTGGTCCTAATTGCTTTCGCTTGGTACTGAAGTCAGATAGATTTGCCAAATTGGCTTCTTCTGGCCAGGGGGATGTTGAAGAGAAATGCTCTGGTGGCGCTGGGGTGCAAATATCATCTAGGAAGAAATCTTCTGGTCCATCTTCTAGAAGGCGAGTAAAGGGAAGCCAAAGTGAAAGTGCTTCGTCCAATGCAAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACAGGACACCGCTTCAGCCTACCACTCAGCATCACCCAAAACTAAACCTGCTGGGAAAGGTGGAATTGGTAAGAGGAACAGTAAACGGGTGGCAGAACGTGTCCTAGTGTGCTTGCAGAAAAGGCAGAAGAAAGCAGTGGTTTCAGATTCTGATTCCATTGGTGAGGCTCTTGATCTTTCTTCAAATGAGATGGTTTCTGACCCACCTGTCATTAGTAGTGATGACAACTTGAGGAAAGAAGAGTTTGTAGATGAGAATATATGTACACGACAATTGACTGATAATAAGTCATGGAAACCTATTGAAAAAGGGCTTCTGGAGAAAGGAGTGGAAATTTTTGGTGGAAACAGCTGTTTAATTTCAAGGAATCTCTTAAATGGTCTTAAGACATGTTGGGAAGTTTTCCAATACATTAATTGCAATGAGGGAAAGGCCTCAGGCCCTGCTGGCGATGCTGCAAATTCCCTCATGGACGGTTATTCCAAGGGTAATAATGAAGTAAGACGAAGATCAAGGTTTTTACGCCGAAGAGGAAGAGTTCGTCGCTTAAAGTATACCTGGAAATCTGCTGCTTACCATTCAATTAGGAAAAGGATTACAGAGAGGAAGGATCAACCCTGCCGGCAGTATAATCCATGTGGATGTCAATCAGCTTGTGGAAAACAGTGTTCTTGTCTTCAAAATGGAACCTGTTGTGAGAAGTACTGTGGGTGCCCCAAGAGTTGTAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGCCGGAGTCGTCAATGTCCGTGCTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGCAGAAATTGTTGGGTCAGTTGTGGTGATGGTACCCTTGGGATTCCCAGCCAAAGAGGTGATAATTATGAATGTAGAAATATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGTTGGGGAGCTTTCTTAAAGAATGGTGTTGGGAAGCATGAATACCTTGGAGAATATACTGGAGAGTTAATTTCACATCGAGAAGCAGATAAACGTGGAAAGATATATGATCGTGAGAATTCATCTTTTCTGTTTAATCTGAACGATCAGTTTGTTCTGGATGCTTACCGTAAGGGTGATAAATTGAAGTTTGCGAACCATTCTCCTGATCCAAATTGTTATGCCAAGGTTATTATGGTTGCGGGGGATCACAGGGTAGGGATTTTTGCCAAGGAAAGGATTAGTGCTGGGGAGGAACTCTTTTATGATTATCGTTATGAGCCAGATAGAGCTCCAGCCTGGGCTCGTAAGCCTGAGGCATCTGGGTCAAGAAAAGATGACGGTGCTCCTTCAAGTGGTCGTGCGAAGAAGCTTGCTTAA 2550 0.4129 LQTKIVQDMSPTLKDVLLVIDSLKEHIAAERCISVKKRIEDNRQKLVGVTNHICKLSMERKTCGITGTNGSLDLLTKRQQDAIDMHNGIHASNGDRESNGFQEESHSSTAVLLGSNVAVKNAVRPVKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIEEEEEKRDFVESEDYILRMTVKEFGLSDQVLESLAQCFSRNTSELKARYEVISDEEKAIGVSKNGDTEDNSQVENSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPADKQPVWNPPDAENTPCGPNCFRLVLKSDRFAKLASSGQGDVEEKCSGGAGVQISSRKKSSGPSSRRRVKGSQSESASSNAKNISESSDSENGPGQDTASAYHSASPKTKPAGKGGIGKRNSKRVAERVLVCLQKRQKKAVVSDSDSIGEALDLSSNEMVSDPPVISSDDNLRKEEFVDENICTRQLTDNKSWKPIEKGLLEKGVEIFGGNSCLISRNLLNGLKTCWEVFQYINCNEGKASGPAGDAANSLMDGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCSCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNGVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEASGSRKDDGAPSSGRAKKLA 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3681 849 MobiDBLite consensus disorder prediction 348 400 - -
Sto6g3681 849 MobiDBLite consensus disorder prediction 335 416 - -
Sto6g3681 849 SMART sant 484 534 IPR001005 -
Sto6g3681 849 SMART sant 186 236 IPR001005 -
Sto6g3681 849 Pfam SET domain 712 814 IPR001214 GO:0005515
Sto6g3681 849 Coils Coil 174 194 - -
Sto6g3681 849 Pfam CXC domain 638 669 IPR041355 -
Sto6g3681 849 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 444 847 - -
Sto6g3681 849 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 14 444 IPR045318 GO:0006338|GO:0018024
Sto6g3681 849 MobiDBLite consensus disorder prediction 823 849 - -
Sto6g3681 849 ProSiteProfiles CXC domain profile. 586 685 IPR026489 -
Sto6g3681 849 SMART CXC_2 634 671 IPR033467 -
Sto6g3681 849 Gene3D SET domain 600 817 IPR046341 -
Sto6g3681 849 MobiDBLite consensus disorder prediction 823 842 - -
Sto6g3681 849 CDD SET_EZH 700 816 - -
Sto6g3681 849 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 19 849 IPR025778 GO:0031519
Sto6g3681 849 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 14 444 - -
Sto6g3681 849 ProSiteProfiles SET domain profile. 700 815 IPR001214 GO:0005515
Sto6g3681 849 SMART set_7 700 821 IPR001214 GO:0005515
Sto6g3681 849 SUPERFAMILY SET domain 574 820 IPR046341 -
Sto6g3681 849 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 444 847 IPR045318 GO:0006338|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3681 Sto-Chr6 41860134 41868110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3681 689 818 C2H2 Transcription Factor Family AT2G23740 27.211 1.05e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto6g3681 SET 1.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3681 - K11430 gmx:100809840 1461.43