Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3661 ATGGCTGTGGAGCTGATGATGGGTTTCAGAAACGATAATTTCGGTGGGAAAATGGAAGAAAATGCTGTTCAAGAAGCCGCCTCTGGTTTAGAGAGCGTGGAGAAGCTCATCAGGTTGCTTTCTCAGAGTCAGCAACAGTACcaatcgtcttcttcttctccggcTTCGGCTTCGTTGGACATGGAGATGGACTGTAAGGCAGTGGCCGACGTGGCAGTTTCCAAGTTCAAGCGGGTGATTTCTCTTCTGGGTCGAACTAGAACCGGACATGCTCGATTCCGAAGAGCTCCTTTGCCTTCTTCCCCTCTCAACCCTCAACCACTATCACAACACCAGCAGCAGCCTTCGGAGCCTAAGGTTTATTATGCGACGCCGTTACAGCAGATCCCGCCCGCTCTTCTTCAACAACACAACACCAACACTCAACACTCTGTGATCCCAAAAAATGGGGTCATTGAAAGGAAGGACTCCTTCAAGACCATCAATTTCTCCTATTCCTCTGCCGCCAATTCCTTCATCTCCTCCCTTACCGGCGACGCTGATAGTAAACAGCCCTCCTCGTCTTCGCCGGCCACTGCTTTTCAGATCACGAATCTGTCTCAGGTCTCGTCGGCGGGGAAACCTCCGCTTTCCTCGTCTTCCTTGAAGAGGAAGTGCAGCTCTGAGAACTTGGGTTCCGGCAAGTGCGGCAGTTCCTCTGGTCGCTGCCATTGCTCCAAAAAGAGCAGAAAAATGAGAGTGAAGAGGGTAGTGAGGGTGCCTGCTATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCCTGGAGGAAGTACGGACAGAAACCCATTAAAGGATCTCCTCACCCTAGGGGATACTACAAGTGCAGCAGTGTGAGAGGGTGTCCAGCTCGGAAACACGTAGAAAGAGCTTTGGATGATCCATCTATGTTAGTAGTCACCTATGAAGGCGATCATAATCACTCCCTCTCTGCCACCGAAGCCACCAATCTCATCCTCGAATCTTCTTAA 1014 0.4911 MAVELMMGFRNDNFGGKMEENAVQEAASGLESVEKLIRLLSQSQQQYQSSSSSPASASLDMEMDCKAVADVAVSKFKRVISLLGRTRTGHARFRRAPLPSSPLNPQPLSQHQQQPSEPKVYYATPLQQIPPALLQQHNTNTQHSVIPKNGVIERKDSFKTINFSYSSAANSFISSLTGDADSKQPSSSSPATAFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSGKCGSSSGRCHCSKKSRKMRVKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGDHNHSLSATEATNLILESS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3661 337 MobiDBLite consensus disorder prediction 200 234 - -
Sto6g3661 337 Pfam WRKY DNA -binding domain 266 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g3661 337 Pfam Plant zinc cluster domain 216 262 IPR018872 -
Sto6g3661 337 Gene3D WRKY domain 251 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g3661 337 PANTHER WRKY TRANSCRIPTION FACTOR 7 ISOFORM X1-RELATED 12 337 - -
Sto6g3661 337 SUPERFAMILY WRKY DNA-binding domain 261 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g3661 337 SMART WRKY_cls 264 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g3661 337 MobiDBLite consensus disorder prediction 91 117 - -
Sto6g3661 337 ProSiteProfiles WRKY domain profile. 259 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g3661 337 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 337 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3661 Sto-Chr6 41720837 41722132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3661 17 328 WRKY Transcription Factor Family AT2G24570 44.923 2.13e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto6g3661 WRKY 7.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3661 - - pop:7462595 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1678 11 15663028 15664124 Sto6g3661 6 41720837 41722132 CCT