Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3657 ATGGCTCTCCCCCATGAAGCCCAAGATTTTCAAGACTCTTCCTTATTCCTTGACGCACTCCTCTGCGAGGAGGCTACTTTTGAGGAAGATTCTGCGTCTGCCCACTCTAATAATACACAAGCAGAAAGTCATAACTATGATTCGACTTCAACCCTTAGGAATCCCTCATCCTGGCCTTTGATTTTGTTGGACAATGACTTGTTTTGGGAAGATCACGAGCTCGTCTCTCTAATCTCCAAAGAGGGACAAACTCATTTCACTTCCATAAATCTAATTGCTGATGCGCTTCTTCAGGAATCACGCCACCAGGCTGTCACCTGGATTTCTAAAGCTTGTTCGCACCATGCTTTCTCTGCTTTGACCGCTGTTCTCGCCGTGAACTACTTCGATAGGTTCATCACGAGCCTGAGGTTTCAGAAGGATAAGCCCTGGATGATACAGCTCACTGCGGTTGCGTCTTTATCGCTGGCTGCCAAAGTGGAGGAGACCCAAGTTCCTCTTCTTCTAGACCTCCAAGTCGAGGAATCCAAGTACTTGTTTGAAGCAAAGACTATACAGAGAATGGAGCTTCTTGTGTTGTCCACTCTTCAATGGAGGATGAATCCGGTGACCCCAATCTCCTTCTTTCAACACATTGTCAGAAGGCTGGGATTAAAGACCCCCTTGCATTGGGAGTTTCTGTTTCGGTGCGAGCGTGTTCTTCTCTCTGTCATTCTGGATTCTAGGATTATGAGTTATCTGCCTTCAATCTTAGCTGTTGCTATAATGATCCACGTTATTAGTGAGATTGAACCATTCAATGCAATGAAACACAGAAATCAGCTCATGGGCATACTCGACATCAGTGAGGAACAAGTGAATAACTGCTACAAACTCATTCTGAAACTATTATGCGGCCAAGAAGACATTCAAAATCTTAACCAGAAACGCAGGCGCCCGTCCGAACCGAGTACCCCAGATGGAGTGATTGATGCACCTTTTAGCCGTGATAGCTCAAATGACTCGTGGACCAAAGCATCATCAGTCTCGTTTTCACTTGAGCCAATGTTCAAGAGGAGCAGAGCTCGAGACCAGCATATGCATTTGCCTTCCATCAGTCGTGTATCTATTGATGTGCTTCACAGCCCTCGTtag 1134 0.4577 MALPHEAQDFQDSSLFLDALLCEEATFEEDSASAHSNNTQAESHNYDSTSTLRNPSSWPLILLDNDLFWEDHELVSLISKEGQTHFTSINLIADALLQESRHQAVTWISKACSHHAFSALTAVLAVNYFDRFITSLRFQKDKPWMIQLTAVASLSLAAKVEETQVPLLLDLQVEESKYLFEAKTIQRMELLVLSTLQWRMNPVTPISFFQHIVRRLGLKTPLHWEFLFRCERVLLSVILDSRIMSYLPSILAVAIMIHVISEIEPFNAMKHRNQLMGILDISEEQVNNCYKLILKLLCGQEDIQNLNQKRRRPSEPSTPDGVIDAPFSRDSSNDSWTKASSVSFSLEPMFKRSRARDQHMHLPSISRVSIDVLHSPR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3657 377 SMART cyclin_7 106 194 IPR013763 -
Sto6g3657 377 SUPERFAMILY Cyclin-like 71 201 IPR036915 -
Sto6g3657 377 MobiDBLite consensus disorder prediction 31 51 - -
Sto6g3657 377 ProSitePatterns Cyclins signature. 101 132 IPR006671 -
Sto6g3657 377 PANTHER CYCLINS 3 361 IPR039361 -
Sto6g3657 377 SMART Cyclin_C_2 203 319 IPR004367 -
Sto6g3657 377 Pfam Cyclin, N-terminal domain 96 201 IPR006671 -
Sto6g3657 377 Gene3D - 92 201 - -
Sto6g3657 377 Pfam Cyclin, C-terminal domain 203 305 IPR004367 -
Sto6g3657 377 SUPERFAMILY Cyclin-like 185 299 IPR036915 -
Sto6g3657 377 MobiDBLite consensus disorder prediction 307 340 - -
Sto6g3657 377 PANTHER CYCLIN-D3-2 3 361 - -
Sto6g3657 377 CDD CYCLIN 100 193 IPR013763 -
Sto6g3657 377 Gene3D - 202 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3657 Sto-Chr6 41687700 41689168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3657 1 367 Core Cell Cycle Gene Families AT5G67260 48.267 1.25e-106 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3657 K14505 - gmx:100785030 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1687 11 15735169 15736769 Sto6g3657 6 41687700 41689168 CCT