Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3650 ATGGAAACTGTACCAAATTTAATCCCCTCCATCCAATTTCAGTCACTTCTATTTTGCCCAAGGGTTAAGATTATTCCGTCCTCCAAAGTCATTCTCTACCCAAGCTCCCTCTGCTTTTCTTCGATTTCATTCGCCCCCTTCTCTTCTCGCCAATTTCCCACTCTTCATCGCCGCCGACTACGTTGTGTTACCCAATCCAGCAGTGATCACCACCACAGCGATCAAACCCTGCACGACCATCACggtcaccaccaccatcacagcGATCAAACGCACCATGACCATCAtggccaccaccaccatcatcaccacttACATGGCAACGACTGCGCGAATCTTAACGGACCTCAAAGAGCGATTATCGGGTTCGCCAAAGCCACCAGATGGATAGACTTGGCAGATTTCTTGAGGGAGCATTTGCATTTATGTTGCTGTTCAACGGCTTTATTCGTGGCTGCTGCCATTTGCCCTCATACCTTGCCAAAGCCCGTCATCAAACCTGTTCAAAATGCTCTTCTTTGCATTGCTTTTCCTTTAGTTGGGGTTTCTGCATCACTTGATGCTCTTATTGAAATTGGCAGTGGAAAAGTGAACATCCATGTGTTAATGGCTATGGCAGCCTTTGCATCAGTTTTCATGGGGAACGCTTTGGAAGGGGGATTACTTCTTGCCATGTTTAATCTGGCACATATAGCTGAGGAGTACTTCACCAGTCGTTCAGTGGTTGACGTTAAAGAGTTGAAGGACAATAATCCAGATTTTGCCCTTGTACTGGAGACTGATAGTGATGATAAACTTCCTAATACCTTTGACTTGGCATACAAGAGGGTCCCTGTCCATGATGTAACAGTAGGCTCATATATCTTGGTTGGAGCCGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCCAAGGTAGTGCCACAATTACCATCGAGCACTTGACAGGAGAAGTTAAACCTTTGGAGGCTAGAGTTGGAGATAGAGTTCCTGGAGGTGCAAGGAATTTGGATGGAAGAATAATTATAAAGGCAACAAAGACTTGGAAGGAATCAACTCTCAGCAGAATTGTGCAGTTGACTGAAGAAGCACAGTTGAATAAACCGAAGCTTCAAAGGTGGCTGGATGAATTTGGTGAGCAATACAGCAAAGTTGTTGTTGTGTTATCAGTTGCCATCGCTGTCATTGGACCACTCATATTTAAGTGGCCTTTCTTTAGTACATCAGCTTATTTAGCGTCTGGTTGTGTAGCTTGCAGAGGTTCAGTTTACAGAGCCCTGGGCCTCATGGTGGCTGCATCACCATGTGCCTTGGCTGTGGCTCCTTTGGCATATGCTACAGCAATTAGCTCCTGTGCAAAAAAGGGGATATTGCTGAAAGGTGGGCATGTTCTGGATGCTCTAGCCTCTTGCCGCACAATTGCATTTGACAAAACAGGGACATTGACGACTGGTGGACTTGTATTCAAAGCAATTGAACCTATTTATGGCCATACTGTTGGAAGCAACATATCAAAAATTTCTTCCTGTTGCATTCCTAGCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCTGCCATGGAAAAGGGTACTACTCACCCCATTGGAAGGGCTGTTGTTGACCACAGTGAAGGGAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAATATTTTCCTGGGAAAGGCCTTGTTGCTACTCTCAACAGCATTGAGTCAAAAACTGGAGGCGCTAAACTTTTAAAAGCATCACTTGGATCTGTAGATTTCATCACTTCATTTTGTCAATCTGAAGATGAGTCAAAAAGGATAAAGGAAGCAGTTAACGCATCTTCTTATGGAGGTGAATTTGTTCATGCAGCCCTTTCAGTTAACGAGAAGGTAACACTGATTCACCTAGAGGATAGGCCTCGACCTGGGGTTTCAAATGTTATACAAGAATTGCAAGATCAAGCAAAGTTTCGTGTGATGATGTTAACTGGTGATCACAAGTCCAGTGCCAGGAGAGTCGCAAGTGCTGTAGGCATCAGTGAGGTGTATTGCAACCTGAAGCCTGAAGATAAGCTCAGTCATGTAAAGGACATCTCAAGGGATAGGGGAGGAGGCCTAATCATGGTTGGTGAAGGTATCAATGATGCCCCAGCACTTGCTGCTGCAACTGTAGGGATTGTACTTGCCCACCGTGCAAGTGCAACTGCCATAGCAGTTGCAGATGTGCTGTTGCTTAGGGAAAATATTTCTGCAGTACCATTTTGTATTGCCAAGTCTCGTCAAACAACTTCACTGATTAAACAAAATGTGGCCCTAGCATTATCCAGCATTCTTATGGCTTCTCTTCCGTCAGTTATGGGATTTTTGCCCCTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTTTGTTTGAATTCCATTCGTGGTTTAAATGAACCAGCTTGGTCCTGGAAGCAGGATATCCTACATTTGATTAACGAAGTTAAATCTAGATTTTTGTCACTCGGGACAAATAGCACTTGCTCAAGTACCCTCAATACCACAAATTTGTAA 2547 0.4338 METVPNLIPSIQFQSLLFCPRVKIIPSSKVILYPSSLCFSSISFAPFSSRQFPTLHRRRLRCVTQSSSDHHHSDQTLHDHHGHHHHHSDQTHHDHHGHHHHHHHLHGNDCANLNGPQRAIIGFAKATRWIDLADFLREHLHLCCCSTALFVAAAICPHTLPKPVIKPVQNALLCIAFPLVGVSASLDALIEIGSGKVNIHVLMAMAAFASVFMGNALEGGLLLAMFNLAHIAEEYFTSRSVVDVKELKDNNPDFALVLETDSDDKLPNTFDLAYKRVPVHDVTVGSYILVGAGESVPVDCEVFQGSATITIEHLTGEVKPLEARVGDRVPGGARNLDGRIIIKATKTWKESTLSRIVQLTEEAQLNKPKLQRWLDEFGEQYSKVVVVLSVAIAVIGPLIFKWPFFSTSAYLASGCVACRGSVYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALASCRTIAFDKTGTLTTGGLVFKAIEPIYGHTVGSNISKISSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGKGLVATLNSIESKTGGAKLLKASLGSVDFITSFCQSEDESKRIKEAVNASSYGGEFVHAALSVNEKVTLIHLEDRPRPGVSNVIQELQDQAKFRVMMLTGDHKSSARRVASAVGISEVYCNLKPEDKLSHVKDISRDRGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSILMASLPSVMGFLPLWLTVLLHEGGTLLVCLNSIRGLNEPAWSWKQDILHLINEVKSRFLSLGTNSTCSSTLNTTNL 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3650 848 Gene3D - 467 755 IPR023214 -
Sto6g3650 848 MobiDBLite consensus disorder prediction 77 106 - -
Sto6g3650 848 SFLD p-type atpase 456 757 IPR044492 -
Sto6g3650 848 CDD P-type_ATPase_HM 143 806 - -
Sto6g3650 848 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 56 840 - -
Sto6g3650 848 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 274 503 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto6g3650 848 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 602 784 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto6g3650 848 Gene3D - 238 364 - -
Sto6g3650 848 Pfam haloacid dehalogenase-like hydrolase 471 717 - -
Sto6g3650 848 ProSitePatterns E1-E2 ATPases phosphorylation site. 476 482 IPR018303 -
Sto6g3650 848 Gene3D - 485 635 IPR023299 GO:0000166
Sto6g3650 848 SUPERFAMILY Calcium ATPase, transmembrane domain M 201 785 IPR023298 -
Sto6g3650 848 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 199 806 IPR027256 GO:0006812|GO:0016021|GO:0019829
Sto6g3650 848 SUPERFAMILY HAD-like 472 804 IPR036412 -
Sto6g3650 848 MobiDBLite consensus disorder prediction 68 108 - -
Sto6g3650 848 SFLD Haloacid Dehalogenase 456 757 - -
Sto6g3650 848 PRINTS P-type cation-transporting ATPase superfamily signature 474 488 - -
Sto6g3650 848 PRINTS P-type cation-transporting ATPase superfamily signature 627 638 - -
Sto6g3650 848 PRINTS P-type cation-transporting ATPase superfamily signature 650 660 - -
Sto6g3650 848 PRINTS P-type cation-transporting ATPase superfamily signature 704 723 - -
Sto6g3650 848 PRINTS P-type cation-transporting ATPase superfamily signature 728 740 - -
Sto6g3650 848 SUPERFAMILY Calcium ATPase, transduction domain A 274 359 IPR008250 -
Sto6g3650 848 Pfam E1-E2 ATPase 274 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3650 Sto-Chr6 41641673 41649168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3650 116 829 Primary Pumps ATPases AT4G37270 76.891 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3650 K01534 - gmx:100776309 1248.03