Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3626 ATGCCTCCCCAAGATAACGATTACGACCAGCCACTGTTAGTCGACTCTTGCCATGACTCGCAAGAAATCGAAACCGCTTACGATTCCTCTGAGAAAGTCGTTATCGTGGGAATCGACGAGTCCGACGGCGATGGGGTTCGTCCCCCGCCGTTCTCATGGAAGAAGCTCTGGCTCTTCACAGGGCCTGGTTTTCTCATGAGCATTGCCTTTCTCGATCCTGGGAATCTCGAGGGAGATCTTCAGGCGGGTGCCATTGCTGGATACTCGCTCCTATGGCTGCTCATGTGGGCCACGGCGATGGGGCTTCTCATTCAGCTTTTGGCGGCTCGGCTCGGAGTGGTGACGGGAAAGCATCTGGCTGAACTGTGCAGAGAGGAGTACCCAGCGTGGGCGAGGATGGTTCTGTGGGTGATGGCGGAGGTTGCTCTGATTGGGTCTGACATACAAGAGGTTATTGGGAGTGCTATTGCTATCAGAATTTTAAGTAATGGGATTGTGCCCATTTGGGCTGGGGTTATCATCACAGCTTGTGATtgttttatttttctgtttcttGAGAACTATGGTGTGAGGAAATTGGAAGCATTTTTCGCTGTTCTCATTGGTCTAATGGCTCTATCATTTGCGTGGATGTTTGGTGAAGCAAAACCCAGCGGCAAAGATCTTCTTCTTGGTATTTTGGTTCCAAGACTTAACTCCAGAACAATACAACAGGCTGTTGGAATTGTGGGTTGCGTTATTATGCCTCACAATGTGTTCCTGCATTCAGCTCTTGTTCAATCAAGACAGGTTGATCAGAGCAAGAAAGCCCGAGTTCAGGAAGCACTTAATTATTATTCTATCGAGTCAACTGTTGCCCTCATAATCTCTTTTATCATCAATGTATTTGTCACAACTGTGTTTGCTAAGGGCTTTTATGGTACTGATCTAGCAAATAGCGTTGGTCTTGTGAACGCTGGGCAGTACCTTGAGGACAAGTTTGGGGGTGGGCTTCTTCCAATCTTATATATATGGGCTATTGGATTATTAGCTGCCGGCCAAAGTAGCACTATTACTGGGACTTATGCTGGACAATTTATCATGGGGGGTTTTCTGAATTTAAGGTTGAAAAAATGGATTAGGTCGTTAATTACACGAAGTTGTGCAATCATCCCAACTTTGATAGTTGCTGTTGTCTTTGAAACCTCAGAGGACTcgttagatgttctaaatgaaTGGCTCAATATTCTACTGTCAATTCAAATCCCCTTTGCCATTATTCCTTTGCTTTGTTTGGTTTCAAAGGAGCAGATAATGGGCGCTTTCAGAATCGGCCCTGTTCTCAAGACTATTGCGTGGCTCGTGGCTGCTCTGGTGATGGCGATTAATGGCTATCTTATGCTAGAATTCTTCAAGTCTGAAGTTAATGGAGTACTGTTTGAACTGAGTATTCTATCTGTGGCCAAGTTCAACTGCAGGAGACTTAAATCACAGAGTAGGAAGTGCCATTTCACTGAAGGGTTTCATGACTACTTTTGCCGCTCATTCTTCTCAAAGCATACTCGTGCTTGTTACTTGTATAACAACTTGATGCTGTATTAG 1581 0.4453 MPPQDNDYDQPLLVDSCHDSQEIETAYDSSEKVVIVGIDESDGDGVRPPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLAARLGVVTGKHLAELCREEYPAWARMVLWVMAEVALIGSDIQEVIGSAIAIRILSNGIVPIWAGVIITACDCFIFLFLENYGVRKLEAFFAVLIGLMALSFAWMFGEAKPSGKDLLLGILVPRLNSRTIQQAVGIVGCVIMPHNVFLHSALVQSRQVDQSKKARVQEALNYYSIESTVALIISFIINVFVTTVFAKGFYGTDLANSVGLVNAGQYLEDKFGGGLLPILYIWAIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWIRSLITRSCAIIPTLIVAVVFETSEDSLDVLNEWLNILLSIQIPFAIIPLLCLVSKEQIMGAFRIGPVLKTIAWLVAALVMAINGYLMLEFFKSEVNGVLFELSILSVAKFNCRRLKSQSRKCHFTEGFHDYFCRSFFSKHTRACYLYNNLMLY 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3626 526 PRINTS Natural resistance-associated macrophage protein signature 135 161 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto6g3626 526 PRINTS Natural resistance-associated macrophage protein signature 165 184 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto6g3626 526 PRINTS Natural resistance-associated macrophage protein signature 190 211 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto6g3626 526 PRINTS Natural resistance-associated macrophage protein signature 239 262 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto6g3626 526 PRINTS Natural resistance-associated macrophage protein signature 346 365 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto6g3626 526 PRINTS Natural resistance-associated macrophage protein signature 374 391 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto6g3626 526 PRINTS Natural resistance-associated macrophage protein signature 408 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto6g3626 526 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 19 477 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto6g3626 526 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 54 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto6g3626 526 Hamap Divalent metal cation transporter MntH [mntH]. 41 464 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto6g3626 526 Pfam Natural resistance-associated macrophage protein 77 438 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto6g3626 526 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 19 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3626 Sto-Chr6 41440679 41443909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3626 1 498 Inorganic Solute Cotransporters AT2G23150 74.802 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3626 K21398 - gmx:100789871 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3626 6 41440679 41443909 Sto11g1712 11 15965778 15969816 CCT