Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3622 ATGTTGGAGTTTTGCCGTAGGCCATTGGAGATGTGCTTTGGTGGAGGAGGTAACGATGAGCTTCTCTGGCATATGGAATTGAAGCCCTACACATTAGGGGATTATTCAATTGCAGTAGTTCAAGCGAATTCGTCTCTGGAAGATCAAAGTCAAGTATTTACCTCTCCATCTGCAACTTATATTGGGGTATACGACGGCCACGGCGGACCAGAAGCTTCCCGTTTTATCACCAATCACCTCTTCGCCTTTCTCCAAAAGTTTTCTTCAGAGGAAGGTGGCTTATCTGAGCACGTGATGAAGAAGGCGTTCGCTGCAACGGAAGAGGAATTCTTAAATTCAGTGAAGCAATCATGGACTACAAGGCCACAGATTGCTTCAGTGGGTTCATGTTGTCTTGTAGGGGTGATTTCAGAGAATGTTCTTTATGTGGCTAACCTTGGGGATTCAAGGGCAGTTTTGGGAAGACAGGAAAATTGTTCTGTTGTGGCGGAGCGTTTGTCCACCGATCATAATGTTGCGGAGGAGGAAGTTAGAAAAGAAGTAATGGCACTTCACCCCGATGATGCACACATTGTAGTTTATACTCGGGGAGTTTGGCGAATCAAGGGCATTATTCAGGTCTCAAGATCAATTGGAGATGTTTATCTGAAGAAACCTGAGTTTAATAGAGATCCTCTGTTCCAACAATTTGGATACCCAGTACCTTTAAAGAGAGGTGTAATAACAGCTGAACCATCAATATTGACTCGGAAATTGAAGCCAGAAGACATGTTTTTAATATTTGCTTCAGATGGTCTTTGGGAGCATTTAACCGATGAAGCTGCCGTTGACATCATCGTCAGAAGTCCAAGAACAGGAATAGCGAAAAGATTGGTGAGAGCTGCACTAGAAGAAGctggaaagaaaaaagaaatgagtTATGAGGATTTAAAGAGAATTGAGAAAGGTGTTAGGCGCCATTTTCATGATGATATTACAGTGATCGTTATATACCTAGATCATTCACAAGATTCTGTAAGCAGTATGTCAAATCGTCATGGTGTCTATAACTGCACTAATGCTCCTGTTGACATATTCTCTCTGAATGCAGACGAAGATGACCTCTAA 1107 0.4173 MLEFCRRPLEMCFGGGGNDELLWHMELKPYTLGDYSIAVVQANSSLEDQSQVFTSPSATYIGVYDGHGGPEASRFITNHLFAFLQKFSSEEGGLSEHVMKKAFAATEEEFLNSVKQSWTTRPQIASVGSCCLVGVISENVLYVANLGDSRAVLGRQENCSVVAERLSTDHNVAEEEVRKEVMALHPDDAHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPLFQQFGYPVPLKRGVITAEPSILTRKLKPEDMFLIFASDGLWEHLTDEAAVDIIVRSPRTGIAKRLVRAALEEAGKKKEMSYEDLKRIEKGVRRHFHDDITVIVIYLDHSQDSVSSMSNRHGVYNCTNAPVDIFSLNADEDDL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3622 368 PANTHER ALPHABET, ISOFORM E-RELATED 3 367 - -
Sto6g3622 368 SMART PP2C_4 25 330 IPR001932 -
Sto6g3622 368 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 367 - -
Sto6g3622 368 CDD PP2Cc 41 332 IPR001932 -
Sto6g3622 368 ProSiteProfiles PPM-type phosphatase domain profile. 34 332 IPR001932 -
Sto6g3622 368 Gene3D - 24 341 IPR036457 -
Sto6g3622 368 Pfam Protein phosphatase 2C 56 299 IPR001932 -
Sto6g3622 368 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169
Sto6g3622 368 SUPERFAMILY PP2C-like 31 334 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3622 Sto-Chr6 41400792 41403043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3622 16 338 PP2C-type Phosphatase Gene Family AT3G51370 55.856 6.62e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3622 - K01102 zju:107434668 593.964