Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3618 ATGTTCCGGTGTCCGATTTGTAGAGCTCAAGGTTTCAGTAGTAATTCCGAGTCAGTTGGGACCCATTTCCCTGTGGAGAACGCGTACGAGCTATTAGGAGTGTCAGAGACATGTTCGTTCGCTGAGATCAAAGCATCTTTTCGCAAATTGGCCAAAGAAACTCACCCGGACCTTGCGGACTCAAGTAATGACTCGTCTGCGTCTCGACGATTTGTGCAAATACTGGCCGCCTATCAGATCCTTTCAGATTCTGAGAAGAGAGCCCATTACGACAGGTACCTGTTGTCTCAGAAGAAGCTTGTGCTGAAGCATTCTGGACAGGGTTCAAAACTGCACTTTTATAAATCACATGACAGGGAATTCAAGGAGATGGAAGTTGTTGAATGGTTAAAGTGGTATAGATTAGCTATAAATGATATTGTATCAGAGAAGAGGGTAGTTGTTGGAACAGGCTATTTTGATGTACTTGAGAGAGATTTTTACTCTGCCATACAAACGGCATACTTTGGCCCTGAAATTGAGTCTATGGAGCTTCTACCTGAGTGCTTTGAGGCTGAGGAAAGGTCTTCTTGTGAAACACCAGAGGTTTTGCACTTAGTTTCAGGTCGTGATCTTTTTGGGATGGTTTGCCTTGCCAACAAGATCCCAGAGATATCATCTACTAATAATGAAAAGTTAACTTCTATCAGATTCTTGCATCCAGGCCTATGCCAATCTATAAAGAATGTGAACATCCACACGAATGCAGAAGTTCCTCATGAATTTGGAATTCCACAAATTCATGGCTCTAAAATTTCAAGTAATGTGTCAGATACATATAGGGATCTAGAATTGCATGTCTCTGGAAGGGTAGTTGCTGTGGCCTCCAGGGACCCTCCTAGAAGCTATTCTGATGGTCTGCTAAAAGAAGATGCAGAAGATCGCATTCATGTTTTTCTTAATTCAGTTGGAACAAGAATTCAATTGGGAACCATAGCTGGACTTGGGACCAGTCCGGATGAAGGTTCCTGTTATGTCTACGACAGCAGAGGTGCGAAGACACATGTGATTATGAAACACAGAACCTTGCTGGTGAAGCATATGCACTGGTATGAAATTGGAGAGAAAGTTTCTATTTGTGAGTGTAGATGCACAAGAGCTAAATTACCACCAAGCAGGTAA 1161 0.4264 MFRCPICRAQGFSSNSESVGTHFPVENAYELLGVSETCSFAEIKASFRKLAKETHPDLADSSNDSSASRRFVQILAAYQILSDSEKRAHYDRYLLSQKKLVLKHSGQGSKLHFYKSHDREFKEMEVVEWLKWYRLAINDIVSEKRVVVGTGYFDVLERDFYSAIQTAYFGPEIESMELLPECFEAEERSSCETPEVLHLVSGRDLFGMVCLANKIPEISSTNNEKLTSIRFLHPGLCQSIKNVNIHTNAEVPHEFGIPQIHGSKISSNVSDTYRDLELHVSGRVVAVASRDPPRSYSDGLLKEDAEDRIHVFLNSVGTRIQLGTIAGLGTSPDEGSCYVYDSRGAKTHVIMKHRTLLVKHMHWYEIGEKVSICECRCTRAKLPPSR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3618 386 CDD DnaJ 27 83 IPR001623 -
Sto6g3618 386 Pfam DnaJ domain 27 91 IPR001623 -
Sto6g3618 386 SUPERFAMILY Chaperone J-domain 24 97 IPR036869 -
Sto6g3618 386 ProSitePatterns Nt-dnaJ domain signature. 71 90 IPR018253 -
Sto6g3618 386 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 12 386 - -
Sto6g3618 386 SMART dnaj_3 26 86 IPR001623 -
Sto6g3618 386 Gene3D DnaJ domain 17 113 IPR036869 -
Sto6g3618 386 ProSiteProfiles dnaJ domain profile. 27 94 IPR001623 -
Sto6g3618 386 PRINTS DnaJ domain signature 29 47 IPR001623 -
Sto6g3618 386 PRINTS DnaJ domain signature 47 62 IPR001623 -
Sto6g3618 386 PRINTS DnaJ domain signature 66 86 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3618 Sto-Chr6 41382975 41385365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3618 29 91 C2H2 Transcription Factor Family AT1G74250 40.909 3.08e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3618 - - gmx:100805332 583.178