Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto6g3591 | ATGGAGAGTTATTTAAATGAACACTTCGGAAGAGTGAAGTCAAAGAACTCGTCCGGCGAAACTCTTGGGAAATGGAGGAAACTCTGTGGCTTAGTGAAGAACCCAAAACGACGCTTTCGTTTCACTGCCAATCTCTCCAAGCGGGAGGAGGCAGCTGCTATGCGTCGTACCAATCAGGAGAAGCTGAGGGTTGCTGTTTTGGTTTCCAAAGCCGCATTTCAATTTATCCAAGGTGTGCAACAAAGTAAATATTCTGTACCTGAGGACGTTAAAGCTGCAGGTTTTCAGATCTGTGCTGAAGAATTGGGGTCTATTGTTGAAGGCCATGATTTAAAGAAGCTAAGAAATCATGGTGGGACTAGTGGTATAGCAGAGAAGCTTTCTACATCGACCACTGATGGGCTTAGCACTGATGTTGATACACTGAATAAGAGACAGCAGGTTTATGGAATCAACAAATTTACTGAGAGTAAAGCCCGGAGTTTCTGGGTTTTCGTTTGGGAAGCCCTCCAAGACATGACTCTTATGATACTTGGAGTGTGTGCTTTTGTATCTCTCATTGTTGGCATAGCAATGGAAGGATGGCCCCATGGAGCCCATGATGGTCTTGGAATTGTTGCAAGTATCTTATTGGTTGTCCTTGTGACAGCAACAAGTGATTATCGCCAATCACTACAATTCAGGGATTTGgacaaggagaagaagaagatttccATCCATGTCACAAGAAATGGTTACAGGCAGAAAATGTCAATATATGATTTACTTCCAGGTGACATTGTGAATCTTGCTATAGGAGACCAAGTCCCAGCAGATGGACTATTTATTTCGGGATTTTCTCTGTCGATCGATGAGTCAAGTTTAACAGGAGAGAGTGAGCCAGTGATGGTGTGTTCTGAAAATCCATTTCTTCTCTCCGGAACAAAGGTCCAAGATGGATCTTGCAAGATGTTGGTTACCACAGTTGGAATGAGGACTCAATGGGGTAAGTTGATGGCAACTCTGAGTGAAGGAGGAGATGATGAAACCCCATTACAAGTGAAGTTGAATGGAGTGGCCACCATTATTGGGAAGATAGGCCTATTCTTTGCTGTAATTACTTTTGCAGTTTTAGTGCAAGGACTTGTGAGCCGTAAGTACCAACAAGGAAGCTTCTTGACCTGGTCTGGTGATGATGCCTTGGAAATGTTGGAATTCTTTGCTGTAGCAGTTACTATCGTTGTTGTTGCTGTTCCAGAAGGGCTGCCATTGGCTGTGACATTGAGCCTTGCTTTTGctatgaagaagatgatgaatgaCAAAGCCCTTGTCCGGAATTTGGCAGCTTGTGAGACCATGGGATCAGCCACAACCATTTGTAGTGACAAGACAGGAACATTAACTACCAACCGCATGACAGTTGTGAAAACATGCATATGTATGAACAGCAAGGAATCAATATTTACCAACACTGGAGGAGAAGTTGTGGTTAATGAAAAAGGAAAACGCGAGATTTTGGGAACACCAACAGAGACTGCAATATTGGAGTTTGGATTGTCACTTGGTGGGGATTTTCAGACAGAGAAACAAGCATGTAAGCTTGTTAAAGTTGAGCCATTTAACTCTACAAAGAAAAGGATGGGCGTGGTTTTGGAGCTTCCAGAAGGAAAAGGCTTACGAGCCCACACTAAAGGTGCTTCTGAAATAATTCTAGCTGCCTGTGACAAGGTTATGAATTCCAAAGGCGAGGTTGTTCCTCTTGATGAAGAATCAAGAAATCATCTTACGGCTACAATCAACCAATTTGCTAGTGAGGCACTTAGAACTCTATGCCTTGCCTATATGGACTTGGAAAAGGGATTCTCAGCTGAAGATACGATTCCAGTTTCTGGGTATACTTGTATTGGAGTTGTTGGTATTAAGGATCCTGTTCGTCCTGGTGTTAAGGAATCGGTTGCAGTTTGTCGTGCAGCTGGCATAACTGTAAGGATGGTCACAGGTGACAATATTAACACTGCAAAGGCTATAGCTAGAGAATGTGGAATTTTAACAGATGATGGCATAGCCATTGAAGGTCCAGAATTTAGGGAGAAGAGTCAGGAGGAATTGTTGAAACTGATTCCAAAAATTCAGGTTATGGCTCGCTCTTCACCTTTAGACAAGCACACATTGGTGAAACACCTGCGTACCACGTTTGGGGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGATGCCCCAGCCCTTCATGAAGCTGACATAGGACTTGCAATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTAATCATTCTGGATGATAATTTCTCCACGATCGTGACAGTGGCTAAATGGGGACGATCAGTATACATAAACATTCAGAAATTCGTACAGTTCCAGCTGACTGTTAATGTGGTGGCATTACTAGTGAACTTCACATCAGCATGCCTGACAGGAAATGCACCCCTCACAGCTGTGCAACTACTGTGGGTGAACATGATAATGGACACACTGGGAGCACTGGCACTTGCAACTGAACCTCCGAATAATGAATTGATGAAGCGTTCTCCAGTGGGAAGGAGTGGGAATTTCATTAGCAACATCATGTGGAGGAACATATTGGGACAATCTTTGTATCAGATTATGGTGATATGGTTTCTTCAGACCAGAGGAAAAATGTTCTTTAATCTCAATGGTCCTGATGCTGATATGATCTTAAACACACTTATTTTCAACACATTTGTCTTCTGCCAGGTTTTCAATGAAGTAAGCTCACGTGAGATGGAGAAAATAAATGTTATCAAAGGATTATTGAATAATTATGTGTTTGTAGGTGTCATCAGTTGCACTATTATCTTTCAAATCATAATTGTTGAGTTCTTGGGAACCTTCGCAAATACCACACCTCTCACTCTGCAGCAGTGGTTCTCAAGCATACTTATCGGATATTTGGGAATGCCAATTGCAGCTGCAATAAAGATGCTTTCTGTCTGA | 2982 | 0.4199 | MESYLNEHFGRVKSKNSSGETLGKWRKLCGLVKNPKRRFRFTANLSKREEAAAMRRTNQEKLRVAVLVSKAAFQFIQGVQQSKYSVPEDVKAAGFQICAEELGSIVEGHDLKKLRNHGGTSGIAEKLSTSTTDGLSTDVDTLNKRQQVYGINKFTESKARSFWVFVWEALQDMTLMILGVCAFVSLIVGIAMEGWPHGAHDGLGIVASILLVVLVTATSDYRQSLQFRDLDKEKKKISIHVTRNGYRQKMSIYDLLPGDIVNLAIGDQVPADGLFISGFSLSIDESSLTGESEPVMVCSENPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLVSRKYQQGSFLTWSGDDALEMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMNSKESIFTNTGGEVVVNEKGKREILGTPTETAILEFGLSLGGDFQTEKQACKLVKVEPFNSTKKRMGVVLELPEGKGLRAHTKGASEIILAACDKVMNSKGEVVPLDEESRNHLTATINQFASEALRTLCLAYMDLEKGFSAEDTIPVSGYTCIGVVGIKDPVRPGVKESVAVCRAAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFREKSQEELLKLIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFTSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRSPVGRSGNFISNIMWRNILGQSLYQIMVIWFLQTRGKMFFNLNGPDADMILNTLIFNTFVFCQVFNEVSSREMEKINVIKGLLNNYVFVGVISCTIIFQIIIVEFLGTFANTTPLTLQQWFSSILIGYLGMPIAAAIKMLSV | 993 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto6g3591 | 993 | Gene3D | - | 238 | 317 | - | - | |
| Sto6g3591 | 993 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 205 | 375 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Sto6g3591 | 993 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 389 | 477 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Sto6g3591 | 993 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 702 | 814 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Sto6g3591 | 993 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 522 | 677 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Sto6g3591 | 993 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 109 | 991 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Sto6g3591 | 993 | SUPERFAMILY | HAD-like | 451 | 837 | IPR036412 | - | |
| Sto6g3591 | 993 | Pfam | E1-E2 ATPase | 237 | 431 | - | - | |
| Sto6g3591 | 993 | Gene3D | - | 637 | 748 | IPR023214 | - | |
| Sto6g3591 | 993 | Gene3D | - | 17 | 77 | - | - | |
| Sto6g3591 | 993 | PRINTS | H+-transporting ATPase (proton pump) signature | 588 | 606 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Sto6g3591 | 993 | PRINTS | H+-transporting ATPase (proton pump) signature | 732 | 748 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Sto6g3591 | 993 | PRINTS | H+-transporting ATPase (proton pump) signature | 764 | 789 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Sto6g3591 | 993 | Pfam | Cation transporting ATPase, C-terminus | 817 | 991 | IPR006068 | - | |
| Sto6g3591 | 993 | SFLD | Haloacid Dehalogenase | 435 | 784 | - | - | |
| Sto6g3591 | 993 | PRINTS | P-type cation-transporting ATPase superfamily signature | 284 | 298 | - | - | |
| Sto6g3591 | 993 | PRINTS | P-type cation-transporting ATPase superfamily signature | 453 | 467 | - | - | |
| Sto6g3591 | 993 | PRINTS | P-type cation-transporting ATPase superfamily signature | 629 | 640 | - | - | |
| Sto6g3591 | 993 | PRINTS | P-type cation-transporting ATPase superfamily signature | 651 | 661 | - | - | |
| Sto6g3591 | 993 | PRINTS | P-type cation-transporting ATPase superfamily signature | 732 | 751 | - | - | |
| Sto6g3591 | 993 | PRINTS | P-type cation-transporting ATPase superfamily signature | 756 | 768 | - | - | |
| Sto6g3591 | 993 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 118 | 991 | IPR023298 | - | |
| Sto6g3591 | 993 | SFLD | p-type atpase | 435 | 784 | IPR044492 | - | |
| Sto6g3591 | 993 | SUPERFAMILY | Calcium ATPase, transduction domain A | 238 | 333 | IPR008250 | - | |
| Sto6g3591 | 993 | SMART | Cation_ATPase_N_a_2 | 116 | 190 | IPR004014 | - | |
| Sto6g3591 | 993 | PANTHER | CATION TRANSPORTING ATPASE | 3 | 991 | - | - | |
| Sto6g3591 | 993 | PANTHER | CALCIUM-TRANSPORTING ATPASE 1 | 3 | 991 | - | - | |
| Sto6g3591 | 993 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 455 | 461 | IPR018303 | - | |
| Sto6g3591 | 993 | Gene3D | - | 749 | 993 | - | - | |
| Sto6g3591 | 993 | CDD | P-type_ATPase_Ca_PMCA-like | 142 | 865 | - | - | |
| Sto6g3591 | 993 | Gene3D | - | 484 | 636 | IPR023299 | GO:0000166 | |
| Sto6g3591 | 993 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 462 | 636 | IPR023299 | GO:0000166 | |
| Sto6g3591 | 993 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 50 | IPR024750 | GO:0005516 | |
| Sto6g3591 | 993 | Pfam | Cation transporter/ATPase, N-terminus | 118 | 185 | IPR004014 | - | |
| Sto6g3591 | 993 | Pfam | Cation transport ATPase (P-type) | 490 | 570 | - | - | |
| Sto6g3591 | 993 | Gene3D | - | 318 | 483 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto6g3591 | Sto-Chr6 | 41211060 | 41215896 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto6g3591 | 1 | 993 | Primary Pumps ATPases | AT4G37640 | 80.197 | 0.0 | 1668 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto6g3591 | K01537 | - | gmx:100792691 | 1683.31 |