Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3583 ATGAATCATTCCTCCCATTCCAACATCGTTGCTAGCTTCTCAATGGCGGCTTCCGTATCGAGCTATTGCATTTCTTTCCGCAAACCTCCCACATCTTCAGATTTCCATGTACACAATGAACTCTCCTATCCTTCACGCCATTTCTACCGACAACTCAATGTCAAATTTCGTTCTCTAAAACCCTTAGTTTTAGCCACCGATGCTGATTCAAAGCGAGATAAGAAAATCTCAACTAAATGCAGTCTGTTCAGTGACGAAATTGGAGGGAGCGTGGAAGAGGGGAGCTATAGCTCTGTGGGAGATAAGCAATTTGTGCGCTGGTTTCGTGAGGCCTGGCCTTACTTGTGGGCCTATAGGGGTGGCACCTTCGTTGTTATTATTTCCGGTGAAATTGTGGCTAGTCCTTTCTTAGATCTCATTCTCAAGGCAAGCCTTTCTTTTGTGTTAAAATTTGATATAGCTTTCCTTCATCACCTGGGCATCCGATTTGTTCTTGTTCCGGGGACCCATGTGCAAATAGACAAGCTTTTGACTGAGAGAGGGAGCCAACCTAAATATGTTGGCCGATATAGGATAACTGATGATGAGTCTCTTGCTGCTGCAATGGAAGCAGCTGGAGGAATAAGATTGATGATAGAAGCAAAACTTTCTCCTGGACCCTCCATATGCAATATTCGTCGACATGGTGACAATAGCCGTTGGCATGAAGTTGGTGTCAGTGTTGCCAGCGGTAACTTCCTTGCAGCCAAGAGAAGAGGGGTTGTTGATGGAATTGACTATGGATCAACTGGAGAAGTAAAAAAAGTAGACGTTTCTCGCATGCGTGAGAGGCTTGATGGTGGTTGTATAGTTATTTTAAGTAACCTGGGCTATTCCAGCTCTGGAGAAGTATTAAATTGCAAGTATGTCTTACAGCTTCTGATTATTGCTTTTTACAATTCTGAGATATGTGATTGCATGCTAACATATGATATGTTGTGCACATATGAAGTTGCAACAGCTTGTGCCTTAGCTATTGGAGCAGACAAGCTTATTTGTATAATAGATGGTCCAATACTTGATGAGAGTGAACGCCTTATTCGGTTCTTGCCTCTTCAAGAAGCTGATTTGTTAATTCGTAAACGGGCTGAGCAAAGTGAAATAGCTGCTAACTATGTGAAAGCTGTTGATGTGGATGGTTTCAACTCTCTTGGTTATAAAAACTCTAATGGGACAGCCCATTCTCCACAGAAAGGAGATGCTTCTACCAGAATTCATACTGCAACCTTCCATAATGGCGTTGGTTTTGACAATGGAAATGGGCTGTGGTCTCGTGAACAAGGTTTTGCTATTGGAGGTCAGGAGCGGCTAAGTCGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCTTTTGTCTGCAGAGGAGGAGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAGAGAGATGGTATGGGTACGATGGTGGCCAGCGATCTGTATGAAGGCACTCGGATGGCTCAAGATGCTGATCTTTCTGGAATAAAACAACTTATTCAACCTTTGGAGGCATCTGGCGTATTGGTTAAGCGGACTGATGATGAGTTGCGTCAATCATTGGATTCCTTTATTGTTGTGGAGAGAGAAGGTCAGATAATTGCTTGTGCTgcactttttcctttctttgagGAGAAGTGTGGAGAGGTTGCTGCCATTGCAGTATCTCCTGACTGTCGAGGCCAAGGACAGGGTGACAAATTGCTTGACTATATTGAGAAAAAGGCTTCGTCTCTCGGGTTGAATATGCTTTTCCTGCTTACAACTCGAACAGCAGATTGGTTCGTGAGACGTGGATTTTCAGAGTGTTCAATCGATTATTTACCGAAGAAGAGGAGGGAAAAAATCAATTTGTCCCGTAACTCCAAGTATTATATGAAGAGGCTTCTACCCGACCGAAGTGGAATTACTGTTGGTAGGAAATCTGCACATGGTTAG 2004 0.4286 MNHSSHSNIVASFSMAASVSSYCISFRKPPTSSDFHVHNELSYPSRHFYRQLNVKFRSLKPLVLATDADSKRDKKISTKCSLFSDEIGGSVEEGSYSSVGDKQFVRWFREAWPYLWAYRGGTFVVIISGEIVASPFLDLILKASLSFVLKFDIAFLHHLGIRFVLVPGTHVQIDKLLTERGSQPKYVGRYRITDDESLAAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVDGIDYGSTGEVKKVDVSRMRERLDGGCIVILSNLGYSSSGEVLNCKYVLQLLIIAFYNSEICDCMLTYDMLCTYEVATACALAIGADKLICIIDGPILDESERLIRFLPLQEADLLIRKRAEQSEIAANYVKAVDVDGFNSLGYKNSNGTAHSPQKGDASTRIHTATFHNGVGFDNGNGLWSREQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQDADLSGIKQLIQPLEASGVLVKRTDDELRQSLDSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDYLPKKRREKINLSRNSKYYMKRLLPDRSGITVGRKSAHG 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3583 667 CDD NAT_SF 546 608 - -
Sto6g3583 667 Gene3D - 505 651 - -
Sto6g3583 667 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 505 653 IPR000182 GO:0016407
Sto6g3583 667 SUPERFAMILY Carbamate kinase-like 453 501 IPR036393 -
Sto6g3583 667 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 459 651 IPR010167 GO:0004042|GO:0005737|GO:0006526
Sto6g3583 667 Pfam Acetyltransferase (GNAT) family 540 610 IPR000182 GO:0016407
Sto6g3583 667 PANTHER AMINO-ACID ACETYLTRANSFERASE 40 658 IPR010167 GO:0004042|GO:0005737|GO:0006526
Sto6g3583 667 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 508 654 IPR016181 -
Sto6g3583 667 CDD AAK_NAGS-ABP 103 499 IPR033719 -
Sto6g3583 667 Hamap Amino-acid acetyltransferase [argA]. 103 651 IPR010167 GO:0004042|GO:0005737|GO:0006526
Sto6g3583 667 Gene3D - 102 504 IPR036393 -
Sto6g3583 667 SUPERFAMILY Carbamate kinase-like 102 373 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3583 Sto-Chr6 41157829 41163207 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sto6g3583 Acetyltransf_1 8.8e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3583 K14682 - tcc:18611300 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3583 6 41157829 41163207 Sto11g1757 11 16390698 16394566 CCT