Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3566 ATGTTGTCCACTCTCCCTCCCTCCGATCCTTTGCTCGGAAACCCCTTCTCCGCCTTCGACGGTGGTTTTCCGCCGTGGGAGATGCCGGACTTCTCTTCCCTCTTCAAACCCTTACCTACCAAGCAGCCCGTGGTGGATGTTGTCACTAATTCGAGTTCCGGTTCAGACGAGCCGGACCTGCAAACCCATTCCGCGAAAAGAAAAACCCCCGGTTCCGAACCCAACCCCGCGGATTGCGTGATGGAGGAGCGAAAGCGGAGACGAATGGTATCGAACCGGGAGTCGGCCAGGCGGTCGAGGATGCGTAAACAGCGGCACTTAGAGAACTTACGGAACCAGGTGAACAAGTTTAGGATGGAAAACCGAGAACTGAACAACCGGTTGCAGTTCCTGCTGCATCACTCGAACCGTGTACGAACCGAAAACGAATGGCTCCAGTCCGAGCGAACCATGCTCCGGCAAAGACTGTCCACCATAACTCAATTTTTGGTTTTGCAACAATTGCAAATTAAAGGGATGGGGAATCAGATTGAaatccatcatcatccatgtgCTAAAGTTTTTGAGGAAGGGCCTTACGAACCCCAGGCTTGTCCTCCCAAGAGAAGGGAATGCTGCCATTGGAATGAACCTTTTTGTTCTAGCTTCATTCAATCCGACGCCATGGAATTAATATCTGCGCAAAATTTACTATCTCCGCCCACATCATTTCGACCATCTCTGCCTTCTGCTATTGTCTCGTCCCATAGTTTCTCCATCCCATTCTTACCTCCTAAATCTTATGCTTTTTCCACTGGAGCCATTTATATCTCTAACAATAGGGGCTCAGCAGCTGTTAAACGAAAAGCGCCTATGGTTGCAAGAGCTTCGACCTTGCCGTATAGTCCAAATATTGCGGAGGATCTAGCTGATGTTACCATCCTCACTGCTGCCGGTGAACCTGTTATGTTCAAAGATCTCTGGGATCAGAACCAGGGAATAGCTGTTGTGGCCCTCTTAAGGCATTTTGGATGCCCTTGCTGTTGGGAATTAGCTTCAGcactaaaagaaaacaaatcacGGTTCGATTCAGCTGGTGTGAAACTAATTGCAGTGGGTGTTGGTGCTCCCAATAAAGCCCGTATCCTTGCTGAACGATTACCATTTCCAATGGATTGCCTTTATGCGGATCCCGAGTGCAAGGCATATAAAATTTTGGACCTATACCATGGTTTTGGCCGTACATTCTTCAACCCCGCCAGTGCAAAAGTGTTGTCGAGGTTTGATGCTTTGCAGAAAGCAGTAAAGAATTATTCGATTGAAGCAACTCCAGATGATAGAAGCGGTGTCTTACAACAGGGGGGAATGTTTGTATTCAAAGGAAAGCAGTTGTTGTATGCAAGGAAGGATGAAGGGACAGGTGACCATGCTCCTTTAGATGACATTTTTTATGTGTGCTGCAAGGCTCCTGTTGCTTAA 1458 0.4691 MLSTLPPSDPLLGNPFSAFDGGFPPWEMPDFSSLFKPLPTKQPVVDVVTNSSSGSDEPDLQTHSAKRKTPGSEPNPADCVMEERKRRRMVSNRESARRSRMRKQRHLENLRNQVNKFRMENRELNNRLQFLLHHSNRVRTENEWLQSERTMLRQRLSTITQFLVLQQLQIKGMGNQIEIHHHPCAKVFEEGPYEPQACPPKRRECCHWNEPFCSSFIQSDAMELISAQNLLSPPTSFRPSLPSAIVSSHSFSIPFLPPKSYAFSTGAIYISNNRGSAAVKRKAPMVARASTLPYSPNIAEDLADVTILTAAGEPVMFKDLWDQNQGIAVVALLRHFGCPCCWELASALKENKSRFDSAGVKLIAVGVGAPNKARILAERLPFPMDCLYADPECKAYKILDLYHGFGRTFFNPASAKVLSRFDALQKAVKNYSIEATPDDRSGVLQQGGMFVFKGKQLLYARKDEGTGDHAPLDDIFYVCCKAPVA 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3566 485 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Sto6g3566 485 SUPERFAMILY Thioredoxin-like 302 404 IPR036249 -
Sto6g3566 485 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Sto6g3566 485 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Sto6g3566 485 MobiDBLite consensus disorder prediction 46 105 - -
Sto6g3566 485 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Sto6g3566 485 CDD PRX_like2 302 464 - -
Sto6g3566 485 Pfam AhpC/TSA antioxidant enzyme 348 465 IPR032801 -
Sto6g3566 485 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Sto6g3566 485 Gene3D Glutaredoxin 296 476 - -
Sto6g3566 485 PANTHER - 269 485 IPR032801 -
Sto6g3566 485 PANTHER OS03G0729300 PROTEIN 269 485 - -
Sto6g3566 485 Coils Coil 93 127 - -
Sto6g3566 485 Pfam bZIP transcription factor 84 142 IPR004827 GO:0003700|GO:0006355
Sto6g3566 485 MobiDBLite consensus disorder prediction 78 97 - -
Sto6g3566 485 Gene3D - 82 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3566 Sto-Chr6 41077405 41089026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3566 1 182 bZIP Transcription Factor Family AT2G22850 34.934 8.38e-27 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto6g3566 AhpC-TSA_2 5e-18 CL0172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3566 - - qsu:112015754 369.007