Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3544 ATGCCAAATCTCCGGCATTTGCATCTCGGAGGCAACTTCTTTGAGGGTCAGATCCCGCCTCAGTACGGAACCTGGGAACACTTGGAATACTTGGCTGTTTCTGGTAACGAGTTGGCCGGCACTATACCGCCGGAGATCGGAAATTTGACCAGTCTCCGGGAACTCTATATCGGATACTTCAACACATATGAAGGGGGAATACCACCTGAGATCGGAAACTTGTCGGAGTTGGTGAGGTTTGACGCGGCGAACTGTGGGTTAACTGGTGAGATACCACCGGAACTCGGGAAGCTTCAGAAACTCGATACTTTGTTTCTTCAAGTGAATGGACTTTCAGGGTCTCTGACGCCAGAACTGGGGAACTTGAAGAGCTTGAAATCCATGGATTTGTCCAACAATATGCTTACGGGTGAGATTCCGGAGAATTTTTCTGAGCTTAAAAACCTGACTCTTTTGAACTTGTTCAGAAATAAGCTTCATGGAGCCATTCCTGAGTTCATTGGAGATATGCCGGCCTTGGAGGTGCTGCAGCTTTGGGAGAATAACTTCACTGGCAGGATTCCTCAGGGTTTGGGGAAGAACGGGAGGCTCGTACTTGTTGATCTTTCGTCGAACAAATTGACTGGGACTTTGCCTCCTTATATGTGCTCTGGGAATCGTCTTCAGACTTTGATTACTCTAACAAATTTCCTATTTGGTCCTATTCCTGAGTCGCTCGGCAGGTGCGAGTCATTGACTCGGATTCGCATGGGAGAGAACTTTCTAAATGGGTCAATACCGAAAGGCCTTTTTGGGCTTCCCAAACTTACTCAGGTTGAGCTGCAGGACAATCTTCTCTCAGGGCAGTTTCCTCAGGCGGATTCTGTTTCCGTTAATCTTGGTCAGATCACTCTCTCCAACAACCAGCTTTCAGGGAAGTTGCCGCCGACAATCGGTAACTTTTCCGGCATGCAAAAGCTCCTTCTTGATGGCAACAGATTCTCAGGTCCAATCCCTCCTGAGATTGGGAGGTTACAGCAGCTTTCAAAGATAGATTTTAGTCATAACAAATTCTCAGGCCCTATTGCGCCAGAAATAAGTCGTTGCAAGCTGTTGACGTTTGTTGATCTTAGCCGTAATGAACTTTCCGGTGAGATCCCGAATGAGATCACGGGTATGCGAATATTGAATTACTTGAATCTTTCTAGGAATCATCTAGTTGGTAGCATCCCCACTTCAATTGCCTCCATGCAAAGCTTGACATCTATTGATTTTTCATATAACAATCTCTCTGGTTTGGTTCCTGGTACTGGCCAATTTAGTTACTTCAACTACACATCATTCCTGGGTAACTCTGACCTTTGTGGCCCATATTTGGGTCCTTGCAAGGATGGGATTGCAAATGGCCCTCACCAACCTCACGGTAAAGGTCCATTCTCTGCTTCTTTGAAGCTCCTGCTGGTGATTGGGTTGCTTGTTTGTTCCATTGCATTTGCTGTTGCAGCAATTATGAAAGCGCGGTCACTGAAGAAGGCCAGCGATGCACGTGCATGGAAATTGACTGCATTCCAACGCTTGGACTTCACTGTTGATGATGTTTTGGATTGCTTGAAGGAGGACaacataatagggaaagggggAGCAGGCATTGTGTACAAGGGAGCAATGCCCAGTGGTGATCAGGTTGCTGTGAAGAGATTACCAGCTATGAGCAGAGGTTCTTCCCACGATCATGGATTCAATGCTGAGATCCAGACATTAGGGAGAATCCGACACAGACACATTGTGAGATTATTGGGTTTCTGTTCAAATCATGAAACAAATCTTTTGGTCTACGAATACATGCCCAACGGAAGTTTAGGTGAAGTCCTTCATGGCAAGAAAGGGGGTCATTTGCTTTGGGATACAAGATATAAGATTGCAGTGGAGGCTGCAAAGGGGCTTTGCTATCTACATCATGACTGTTCACCACTTATTGTTCATAGAGATGTAAAATCAAACAATATCCTTCTTGACTCCAATTTTGAAGCTCATGTTGCTGATTTCGGACTTGCCAAGTTTCTGCAAGATTCTGGAACATCTGAATGCATGTCTGCTATTGCCGGTTCATACGGCTACATAGCTCCAGAGTATGCCTACACACTGAAAGTTGATGAGAAGAGCGATGTATACAGCTTTGGCGTGGTTCTTCTAGAGCTTGTTACGGGCAGGAAACCAGTGGGAGAATTTGGTGACGGGGTGGACATTGTGCAATGGGTGAGGAAAATGACAGACTCCAACAAGGAAGGAGTCTTGAAAGTTCTTGATCCTAGACTTTCCTCAGTACCCCTTGAAGAGGTGATGCATGTTTTTTATGTAGCCATGCTTTGTGTTGAAGAACAGGCAGTAGAGCGGCCAACCATGCGTGAAGTTGTTCAAATTCTAACCGAACTTCCAAAAGCCCCTGGCTCTAAACAGGCAGACTTCACTATAACAGAGTCTTCTCTGTCATCAGCAAACGATTCTGAGGATCCTGCAGCCACCATATCTAAAGAACTAAAAGATGAACAAACACCTCCTCAATCGCCACCTACTGATCTTCTTAGCATATGA 2571 0.4527 MPNLRHLHLGGNFFEGQIPPQYGTWEHLEYLAVSGNELAGTIPPEIGNLTSLRELYIGYFNTYEGGIPPEIGNLSELVRFDAANCGLTGEIPPELGKLQKLDTLFLQVNGLSGSLTPELGNLKSLKSMDLSNNMLTGEIPENFSELKNLTLLNLFRNKLHGAIPEFIGDMPALEVLQLWENNFTGRIPQGLGKNGRLVLVDLSSNKLTGTLPPYMCSGNRLQTLITLTNFLFGPIPESLGRCESLTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNLLSGQFPQADSVSVNLGQITLSNNQLSGKLPPTIGNFSGMQKLLLDGNRFSGPIPPEIGRLQQLSKIDFSHNKFSGPIAPEISRCKLLTFVDLSRNELSGEIPNEITGMRILNYLNLSRNHLVGSIPTSIASMQSLTSIDFSYNNLSGLVPGTGQFSYFNYTSFLGNSDLCGPYLGPCKDGIANGPHQPHGKGPFSASLKLLLVIGLLVCSIAFAVAAIMKARSLKKASDARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPSGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLLWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLSSVPLEEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKAPGSKQADFTITESSLSSANDSEDPAATISKELKDEQTPPQSPPTDLLSI 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3544 856 Gene3D Transferase(Phosphotransferase) domain 1 608 824 - -
Sto6g3544 856 MobiDBLite consensus disorder prediction 840 856 - -
Sto6g3544 856 SUPERFAMILY L domain-like 197 455 - -
Sto6g3544 856 Gene3D Ribonuclease Inhibitor 62 162 IPR032675 -
Sto6g3544 856 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 842 - -
Sto6g3544 856 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 842 - -
Sto6g3544 856 Gene3D Ribonuclease Inhibitor 1 61 IPR032675 -
Sto6g3544 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Sto6g3544 856 Pfam Protein tyrosine and serine/threonine kinase 532 801 IPR001245 GO:0004672|GO:0006468
Sto6g3544 856 Gene3D Phosphorylase Kinase; domain 1 494 607 - -
Sto6g3544 856 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Sto6g3544 856 Pfam Leucine Rich Repeat 3 19 IPR001611 GO:0005515
Sto6g3544 856 MobiDBLite consensus disorder prediction 810 856 - -
Sto6g3544 856 SMART LRR_typ_2 338 362 IPR003591 -
Sto6g3544 856 SMART LRR_typ_2 410 433 IPR003591 -
Sto6g3544 856 SMART LRR_typ_2 122 146 IPR003591 -
Sto6g3544 856 SMART LRR_typ_2 1 27 IPR003591 -
Sto6g3544 856 SMART LRR_typ_2 170 194 IPR003591 -
Sto6g3544 856 SMART serkin_6 530 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3544 856 SUPERFAMILY L domain-like 2 225 - -
Sto6g3544 856 SUPERFAMILY Protein kinase-like (PK-like) 523 801 IPR011009 -
Sto6g3544 856 ProSiteProfiles Protein kinase domain profile. 530 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3544 856 MobiDBLite consensus disorder prediction 813 831 - -
Sto6g3544 856 Gene3D Ribonuclease Inhibitor 169 460 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3544 Sto-Chr6 40917831 40920785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3544 1 831 Receptor kinase-like Gene Family AT5G65700 86.074 0.0 1452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto6g3544 PK_Tyr_Ser-Thr 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3544 - - gmx:100499646 1519.21