Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3533 ATGGCTGGTCTGGATTTAGGCACGGCTTCTTCTGCTTCTCGCTTTGTTCAAAATCTCCACACACCCGACTTGCACCTTCACCGTCACCAACACCAACACCAACACCACCAAACCGATTCCGAAGAAGACGGCAACCAAGGCGGCCCCTTTTCCACCGACGATGCTTCCCCCCACCAACACCTCGTGGGCCGTCGACCCCGCGGCCGTCCTCCCGGTTCCAAGAACAAGCCCAAGCCTCCCGTCATCATCACGCGCGAAAGCGCCAACACCCTACGCGCTCACATCCTCGAAGTTGCCAGCGCCCGCATCGACGGGGGCGGTGGTCACACTTCACGGAAGGTTCGAGATATTGTCGCTGTCGGGATCGTTCCTGCCGCCGCCGGCTCCGCCGGGAGCGACGAGTTTGACGATATACGTGGGAGGAGGACAAGGGCAGGTGGTGGGAGGGAGTGTGGTGGGGGAGTTGACGGCAGCAGGACCGGTTATAGTGATTGCGGCTTCCTTCACGAACGTGGCTTACGAGAGGCTTCcgttggaggaggaggaggaggagcagGATCATCAGCTTCAGCTTCAGCCTTCTTCTCAGGGTCCGGGTGGGCCATTCCCGGACCCATCTTCGGGTCTACCCTTCTTCAATTTGCCTCTTAA 651 0.573 MAGLDLGTASSASRFVQNLHTPDLHLHRHQHQHQHHQTDSEEDGNQGGPFSTDDASPHQHLVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVASARIDGGGGHTSRKVRDIVAVGIVPAAAGSAGSDEFDDIRGRRTRAGGGRECGGGVDGSRTGYSDCGFLHERGLREASVGGGGGGAGSSASASAFFSGSGWAIPGPIFGSTLLQFAS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3533 216 MobiDBLite consensus disorder prediction 26 81 - -
Sto6g3533 216 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 101 - -
Sto6g3533 216 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 101 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3533 Sto-Chr6 40836721 40837475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3533 62 100 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 89.744 1.45e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3533 - - jre:108994023 95.9005