Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3523 aTGGGAGGGGCATCACTACCACCAGGTTTCCGATTCCACCCAACTGATGAAGAATTGGTGGGATATTACCTGAAAAGAAAAGTGGAGGGGCTCCAAATTGAGCTTGAAGTTATCCCCGTCATCGATCTCTACAAATTCGATCCGTGGGAATTGCCGGAGAAATCGTTCCTACCAAAAAGAGATATGGAATGGTTTTTCTTCTGTCCACGAGATCGCAAGTACCCAAATGGATCAAGAACAAACAGAGCCACCAAAGCTGGGTACTGGAAAGCCACCGGAAAAGACAGGAAGGTTGAGTGCCACTCCTCTGTCACCGGTTACCGGAAAACTCTGGTTTTCTACCGTGGAAGAGCTCCTTTAGGCGATCGAACCGACTGGGTCATGCATGAGTATCGCCTCTCCGATGATCTGTCCCATCCAACCCCAACTTTTCAGGGTGCTTTTGCTTTGTGCCGAGTTATTAAGAAGAATGAGAAGGAAGGAGAACACAAGGGCAAAAAGGGTATAACCGCTTGTGTTAATAATGGGAATGACACTTCAATTAGAATCTCCAATGAGCCTCTGAGCATCTCCGTTGACATTTCTTCTCAAGCAAGTCATGTCCACAATGGGAGTGGTTATTCAAGCCCTACTACTACTTCTCCTTACAATGTGCTTCCAAATGCTGAGTTTGAGCAAGATCCTTCTAATATATGGATCTCTCccgaattcattcttgattcTTCAAAGGACTACCCTCAAGTACAAGATGCATACTTTCCACAGTGTGATTTATCAAGCTCAATGACACCTTGGAAGCCATTGGAACacacagaaatttcacccactTCTTCCTACTCAAATTTCAATGGGGAAATTGACTTTGCTGATGATATTAATGGAATTGGCTGCATGACACCCTTCTCAGCACAAGGAAACTTCATGAACCTCTATGGAAATGACCATGTGTCCTATGAAGTTTTTGATCAAATCAATTCAGTGACATATCCGAGACACTTCTGA 1002 0.4251 MGGASLPPGFRFHPTDEELVGYYLKRKVEGLQIELEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVECHSSVTGYRKTLVFYRGRAPLGDRTDWVMHEYRLSDDLSHPTPTFQGAFALCRVIKKNEKEGEHKGKKGITACVNNGNDTSIRISNEPLSISVDISSQASHVHNGSGYSSPTTTSPYNVLPNAEFEQDPSNIWISPEFILDSSKDYPQVQDAYFPQCDLSSSMTPWKPLEHTEISPTSSYSNFNGEIDFADDINGIGCMTPFSAQGNFMNLYGNDHVSYEVFDQINSVTYPRHF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3523 333 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Sto6g3523 333 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 333 - -
Sto6g3523 333 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Sto6g3523 333 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Sto6g3523 333 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Sto6g3523 333 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3523 Sto-Chr6 40786122 40787610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3523 1 287 NAC Transcription Factor Family AT4G17980 55.743 4.78e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto6g3523 NAM 4.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3523 - - gmx:100792714 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3523 6 40786122 40787610 Sto6g3523 6 40786122 40787610 ECH