Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3472 ATGAAGTGTTTCTTCTTCAAAGGGAAAAAAGGATCAAAATCCGCGCAAGAATCGCAAAaccaaagaaagaagaagaatccgAGTTCGGAGCACTCGGTGAGGTCATCGAGTTCGCTACCGTCACCAACAAAAACCTTGACGGAATTGTACAAAGAGAAAGAGCACAATTTAAGAGTTTTCACTTTGCAAGAGCTTAAAAACGCAACAAATGGTTTCAATAGGATGCTTAAGATTGGAGAAGGGGGTTTTGGGAGCGTGTATAAAGGTACTATTAAGCCTCAAGATGGTCGAGGAGATCCTACTGTAGTTGCCATAAAAAGCCTCAACACCCGTGGCTTCCAGGGGCATAAACAATGGCTCGCAGAAGTTCAGTTTCTGGGTATTGTTGATCACCCAAATTTGGTAAAACTATTGGGATACTGCTCTGAAGATGGAGAAAGAGGAATCCAACGGCTGCTGGTGTATGAATTCATGCCAAATAGGAGCCTAGAAGATCATCTTTTCCGAAGGGCTTTGCCCACCTTACCCTGGAAAACAAGATTGCAGATCATGCTTGGTGCTGCCAGAGGATTAGCTTATCTACATGAAGGATTGGAAGTTCAGGTAATATACCGAGATTTCAAATCTTCAAATGTTTTATTGGACACGGACTTCCATGCAAAGCTCTCAGATTTTGGTCTTGCTAGGGAGGGCCCAATAGGTGATCAAACTCATGTATCTACTGCGGTGGTTGGAACACGTGGATATGCTGCACCAGAATATATTGAAACAGGTCATCTAAAAGTTCAGAGTGACATATGGAGTTTTGGTGTGGTACTGTATGAGATGCTCACAGGGAGGCAGGCATTGGATCGAAGACGTCCAACAGAACAAAAGCTTCTAGAATGGGTTAAACAATATCCTGCTGACAGTAGTAGATTCAGCATCATAATGGACCCACGACTCAGGAATGAATATTCACCTGGTGCTGCTCGCAAGGTAGCCAAGTTGGCAGATAGCTGCTTAAAGAAGAAACCTGAAGAAAGGCCATCCATGAGTCAGGTAGTGGAAAGCTTGAAGCAAGCATTGCAGTATTCAGAAACCTCAAACACGATTTTCTCCTTTCTGGGGTGTCTGGGGTTTTGTCATTCTGTTCGACCCACAAAGTCCTGTCCTGTCTTTGCTTTATCCAACATTGGTTCTCTATTCATTTTGGAGGATAGCATTGAATGA 1212 0.4266 MKCFFFKGKKGSKSAQESQNQRKKKNPSSEHSVRSSSSLPSPTKTLTELYKEKEHNLRVFTLQELKNATNGFNRMLKIGEGGFGSVYKGTIKPQDGRGDPTVVAIKSLNTRGFQGHKQWLAEVQFLGIVDHPNLVKLLGYCSEDGERGIQRLLVYEFMPNRSLEDHLFRRALPTLPWKTRLQIMLGAARGLAYLHEGLEVQVIYRDFKSSNVLLDTDFHAKLSDFGLAREGPIGDQTHVSTAVVGTRGYAAPEYIETGHLKVQSDIWSFGVVLYEMLTGRQALDRRRPTEQKLLEWVKQYPADSSRFSIIMDPRLRNEYSPGAARKVAKLADSCLKKKPEERPSMSQVVESLKQALQYSETSNTIFSFLGCLGFCHSVRPTKSCPVFALSNIGSLFILEDSIE 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3472 403 ProSiteProfiles Protein kinase domain profile. 72 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3472 403 Gene3D Phosphorylase Kinase; domain 1 51 157 - -
Sto6g3472 403 MobiDBLite consensus disorder prediction 16 30 - -
Sto6g3472 403 CDD STKc_IRAK 78 354 - -
Sto6g3472 403 ProSitePatterns Protein kinases ATP-binding region signature. 78 106 IPR017441 GO:0005524
Sto6g3472 403 PANTHER OS01G0588500 PROTEIN-RELATED 13 362 - -
Sto6g3472 403 PANTHER RECEPTOR-LIKE KINASE PLANT 13 362 - -
Sto6g3472 403 SUPERFAMILY Protein kinase-like (PK-like) 54 352 IPR011009 -
Sto6g3472 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Sto6g3472 403 Pfam Protein kinase domain 74 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3472 403 Gene3D Transferase(Phosphotransferase) domain 1 158 367 - -
Sto6g3472 403 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3472 Sto-Chr6 40362982 40365052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3472 3 352 Glycoside Hydrolase AT3G07070 42.382 2.60e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto6g3472 Pkinase 5.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3472 - K00924 gmx:100305403 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3472 6 40362982 40365052 Sto11g1859 11 17352628 17357307 CCT
Sto6g3472 6 40362982 40365052 Sto6g3472 6 40362982 40365052 ECH