Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3464 TTGGCAGTTAGGAAAAGTGGGGTTAGAAGACCGCTGGCCTTGAGACAAAACACACAACACATCGCCTTCGTCGGCCATCCGGATATTATAGTTTATGCCATAACAAACTCAATTGTTTGTGTgatagaggaggaggaggagcttGTGAGGGTGGTGGACATGGAGGAACGGTATGAGCCACTGAAGCATCTTGGTTCGGGGAATTTCGGAGTGGCCAGATTGGTAAGAGATAAGAAGACTAAAGAGCTTGTTGCTGTGAAGTACATAGAAAGGGGGAAAAAGATAGATGAGAAAGTTCAGAGGGAGATCATTAACCATCGGTCCTTAAGACACCCAAACATTATCAAGTTTAAAGAGGTCTTGCTGACCCCTACCCATTTAGCTATTGTCATGGAGTACGCTGCAGGTGGCGAACTCTTTGAGAGAATTTGCAGCGCCGGCCGATTTAGTGAAGATGAGCAAATATGTCACAGAGATCTGAAACTGGAAAACACTCTCTTGGATGGAAGTCCAACACCTCGACTTAAAATATGTGACTTCGGTTATTCCAAGTCTGCTTTGCTTCACTCTCAACCAAAATCAACAGTTGGAACTCCTGCTTACATAGCTCCAGAGGTTCTGTCACGAAAGGAGTATGATGGGAAGATTGCGGATGTTTGGTCCTGTGGTGTGACACTTTATGTCATGTTGGTTGGAGGATACCCATTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACCATTGGAAGAATAATGAGTGTTCAATACTCCATACCCGACTACGTGCGTGTTTCTTCAGATTGCAGACATCTTCTTTCTCGCATTTTTGTTGCCAATCCTgccaagAGAATAACGATCCCAGAGATAAAAGAGCATCCTTGGTTTCTGAAGAACTTGGCAAAGGAAATAAttgaagcagagaagaagaacTCTGATGAAGCACAGAAGGATCAACCAAGCCAGAGTGTTGAAGAAATAATGCGAATCGTACAAGAGGCAAGAACACCTGGGCCAGAATCCAAGGGTGGAGGGCAAGGTGGTGTAGGAGGGTCATTGGAcggtgaagatgatgatgaccaAGAATCTGAAATCGATGCTAGTGGAGACTATGATACCACAACATAG 1128 0.4158 LAVRKSGVRRPLALRQNTQHIAFVGHPDIIVYAITNSIVCVIEEEEELVRVVDMEERYEPLKHLGSGNFGVARLVRDKKTKELVAVKYIERGKKIDEKVQREIINHRSLRHPNIIKFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEQICHRDLKLENTLLDGSPTPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGGYPFEDPEDPRNFRKTIGRIMSVQYSIPDYVRVSSDCRHLLSRIFVANPAKRITIPEIKEHPWFLKNLAKEIIEAEKKNSDEAQKDQPSQSVEEIMRIVQEARTPGPESKGGGQGGVGGSLDGEDDDDQESEIDASGDYDTTT 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3464 375 Pfam Protein kinase domain 58 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3464 375 SMART serkin_6 58 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3464 375 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Sto6g3464 375 MobiDBLite consensus disorder prediction 353 367 - -
Sto6g3464 375 Gene3D Phosphorylase Kinase; domain 1 39 132 - -
Sto6g3464 375 SUPERFAMILY Protein kinase-like (PK-like) 49 304 IPR011009 -
Sto6g3464 375 MobiDBLite consensus disorder prediction 309 375 - -
Sto6g3464 375 ProSiteProfiles Protein kinase domain profile. 58 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3464 375 PANTHER RHO-ASSOCIATED PROTEIN KINASE 1/2-RELATED 56 369 - -
Sto6g3464 375 Coils Coil 297 318 - -
Sto6g3464 375 Gene3D Transferase(Phosphotransferase) domain 1 133 304 - -
Sto6g3464 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Sto6g3464 375 PANTHER SERINE/THREONINE KINASE 56 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3464 Sto-Chr6 40305632 40309758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3464 41 304 CBL-interacting serine-threonine protein kinases AT5G25110 38.356 2.23e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Sto6g3464 Pkinase 8.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3464 K14498 - tcc:18606143 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3464 6 40305632 40309758 Sto11g1867 11 17427180 17430263 CCT