Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3463 ATGGGCCGTAAACCTAGCGAACCGGAGGCCACTCTTCCCAACCATTTGATCCTCCTTTTAGCGTGCTTCATTTCGTGCGGTTTGGTCTACGTCTTCGCCTCTGCGGTGCTCACAACCGGAGGGAACGATTCGTTTTCAGAGGTTAGGTCATTGGCATTGGTCGAAGATGGTGCCGATAATAGAGGATGTTGTAGAGGAATTGAGAACTTGGAACTGTGGGGAGCTGCTGTGAAGTGGGGttctgaatttaaatttaataattcgCAAGATTGCTGCGACGCTTGTAAATCCATGTGTACTGGGAAGGATGGGCCGTGTCTGTGCGATACGTGGGTGTTTTGTGGGAATCGCGAGGCTTGCGGATCGAAATTCGGTGAGTCGCAGAATCAAGTTCTAAACCTAAATGACTGTGATGAGAATAATCCTGTTTGCTGGTTGAAGAAGCAGAAGGATAGCTTAACCCCTGAACGGCAAGATGCTGGGGAAAAAGTTAGTTGGACTTCTGGTCTCATCTTTGGAAAAGGAGAGGATTCTTCCTCACATACTGGCTTACATGCTGGACCTGAAAGAACATTTCCAAATATTGGAGATTCTAGTTGTTTCCTTAATGGCTGGCTTTATAACTTCATTGATTTTTATACCTTGGGGAAATCACGAGATGATATGTACCTGTCAGTGTTGATTATCATGGTCGATGTTGTTCACCTAAAACTTCATATGGGTATTGTTGAGCTAGAAACACAATATGGATCTCTTCGTGTAAAACTCTTCCCTGATTGTGCTCCACACTCAGTTACCTACATTCTGGATTTGTTGGCTTTGCGCCATTGTGCAGGCTGCCAATTTTATCGAGCAGAAAGCCGAGGCCAATCATGGGATTCAGAAGGAAACCACATCAAAAATGCTCCATTTGGTCCCCCTTTTGGTTTAATTCAAGGTACACTGGAAGCCCTGGGAAACCCATTTAAGAAAATTCCAGTAGAAGATTGTCCAACTATACGAAGGGGTTCCATTGCTTGGGTTGATTCAGGACCAGAATTCTTCATTAGCCTTGCTAACCATGGGGAGTGGAAAAGAAGATACACAGTTTTCGGTTCAGTTCTTCCGGAAGACATGAGTATTGCAGAGAAAATTGCTGCACTCCCCACTGTATCTGACGTTTGGAACAATATCAATGTTTCTGTTCTGGAAAAACCCGTTCCCTTGTTGGTACGAAGAATCCAGAAAAGCCATGCAGATATTATCACCAATGCAAATTCAGATTAA 1266 0.4368 MGRKPSEPEATLPNHLILLLACFISCGLVYVFASAVLTTGGNDSFSEVRSLALVEDGADNRGCCRGIENLELWGAAVKWGSEFKFNNSQDCCDACKSMCTGKDGPCLCDTWVFCGNREACGSKFGESQNQVLNLNDCDENNPVCWLKKQKDSLTPERQDAGEKVSWTSGLIFGKGEDSSSHTGLHAGPERTFPNIGDSSCFLNGWLYNFIDFYTLGKSRDDMYLSVLIIMVDVVHLKLHMGIVELETQYGSLRVKLFPDCAPHSVTYILDLLALRHCAGCQFYRAESRGQSWDSEGNHIKNAPFGPPFGLIQGTLEALGNPFKKIPVEDCPTIRRGSIAWVDSGPEFFISLANHGEWKRRYTVFGSVLPEDMSIAEKIAALPTVSDVWNNINVSVLEKPVPLLVRRIQKSHADIITNANSD 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3463 421 Gene3D - 229 398 IPR029000 -
Sto6g3463 421 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 1 177 - -
Sto6g3463 421 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 239 410 - -
Sto6g3463 421 PANTHER EXPRESSED PROTEIN 239 410 - -
Sto6g3463 421 PANTHER EXPRESSED PROTEIN 1 177 - -
Sto6g3463 421 SUPERFAMILY Cyclophilin-like 239 395 IPR029000 -
Sto6g3463 421 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Sto6g3463 421 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 243 385 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3463 Sto-Chr6 40300489 40303018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3463 241 368 U-box Gene Family AT5G67530 26.667 4.86e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3463 - - mdm:103436963 466.077