Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3462 ATGGCATCTACTACTTTGAACTTATTTCCACATCTCTCTGCAGAGGAGATTCCAAAGATCCCAAATTCTAGTGTGACCAAGGAGCCTAAAGTTCCACAGTTGACAATTTTTTATTGTGGGCAAGTTATTGTGTTTGATGATGTTCCAGCTGATAAAGCCATGGAGATCATGTCCTTTGCTAGCAAAGGAGCTTTCTCAACCCAGGACAATCAGAGCCAGCCTTCATTTCCTCCTAATTCAATCAGAGTTTCTTCTGATTCCACTAGGCCAATTTCTCCTAGTACTGCCAACACTTTGATTCAAAGGCACCCTCAGTCACCACCCGGACCTGGGATTGATGATCTACCTATTGCTAGGAAATTTTCACTACATCGGTTCTTGGAGAAGAGGAAGGACAGAATTGCTGCGAGATCGCCATATCAAATTAGCAAACCCATGGAGGCCTATAATAAGCCTAAAGAAACCATGCCGTGTCTAGGATTGGCTGCTAGATCACCACAATGCTGA 507 0.4359 MASTTLNLFPHLSAEEIPKIPNSSVTKEPKVPQLTIFYCGQVIVFDDVPADKAMEIMSFASKGAFSTQDNQSQPSFPPNSIRVSSDSTRPISPSTANTLIQRHPQSPPGPGIDDLPIARKFSLHRFLEKRKDRIAARSPYQISKPMEAYNKPKETMPCLGLAARSPQC 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3462 168 Pfam Jas motif 116 141 IPR018467 -
Sto6g3462 168 Pfam tify domain 29 61 IPR010399 -
Sto6g3462 168 ProSiteProfiles Tify domain profile. 27 62 IPR010399 -
Sto6g3462 168 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 162 IPR040390 -
Sto6g3462 168 MobiDBLite consensus disorder prediction 64 104 - -
Sto6g3462 168 SMART tify_2 27 62 IPR010399 -
Sto6g3462 168 PANTHER PROTEIN TIFY 10A 6 162 - -
Sto6g3462 168 MobiDBLite consensus disorder prediction 64 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3462 Sto-Chr6 40298160 40299192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3462 7 163 Tify Gene Family AT1G19180 42.442 6.19e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sto6g3462 tify 1.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3462 K13464 - gmx:100801449 161.384