Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3436 ATGTCAGTATGGGCCTTTGAGAAGTATGTAGGAAGTGACCTTAAAAATCCCTATGAACATATTTTCCTCCCCAGGAAAGGCACTTGCCTCTTGGATTGCCACATAGCTGCTTGGGATGAGTCCAATGAACATAGATGCAGGGGAGTAGAACCCTTTGTGCCAAAAGAAACTGCCACTGATAAAAGTGATGATCTTTGTTCGATCTGTGGAGATGGGGGAGCTTTAATTTGCTGTGAAAAGTGTCCCTCCACATTCCATCCACACTGTATGAGTATAAAGAATGTTCCTCAAGATGGTGGCTATGTCCTTACTGTGTTTGCAAATTTTGTGAGCTTGGTGTTAACTCTCCTTTCCCTTCCTTTTGCAATGCTCCTGCAAAAGGACTTAACTACACTCATAGAAGAAGCAGAATCAGATGCTAGAGATGGGAGTATAGACCAACAGGCAAATAATCAGAATGCTCAAGAACCTCAGGATCAGGAAGCAGTGATCAGGAGACCAAATATAGATCTGAAtcttaagaagaagaagaaaattaattag 543 0.4052 MSVWAFEKYVGSDLKNPYEHIFLPRKGTCLLDCHIAAWDESNEHRCRGVEPFVPKETATDKSDDLCSICGDGGALICCEKCPSTFHPHCMSIKNVPQDGGYVLTVFANFVSLVLTLLSLPFAMLLQKDLTTLIEEAESDARDGSIDQQANNQNAQEPQDQEAVIRRPNIDLNLKKKKKIN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3436 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 53 106 IPR013083 -
Sto6g3436 180 PANTHER GNAT FAMILY ACETYLTRANSFERASE 1 98 - -
Sto6g3436 180 MobiDBLite consensus disorder prediction 140 180 - -
Sto6g3436 180 MobiDBLite consensus disorder prediction 143 159 - -
Sto6g3436 180 PANTHER PHD FINGER PROTEIN 12 1 98 IPR042163 GO:0003714|GO:0045892
Sto6g3436 180 SUPERFAMILY FYVE/PHD zinc finger 59 97 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3436 Sto-Chr6 40127786 40128676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3436 1 96 PHD Transcription Factor Family AT4G14920 44.330 2.39e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3436 - - pvu:PHAVU_009G190800g 127.872