LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto6g3432	ATGACTATACCCAACATCttcttcctccctcttctcttACTTGTACCCCACCAAGCTTTTGCAAATGTCACTTTGAATTCCACACTCTCTACCAATGATCCAAATCCTCTATGGCTTTCATCTTCTGGCGTATTTGCTTTTGGATTTCAACAGATCAACAATAACACAAGTCTCTTCTTGCTTGCCATCTGGTTCAACAAAATATCTTCTAAAACCATCGTCTGGACTGCAAGTACATCAAACCCAGCACCTGCTGGATCAGAGGTTAAGCTCACAGCACAAGGTCTCACACTCACTAATCCTCAAGGTCATCTTCTATGGAGTGTTCAAGTTGAACCATCGGAAGATGTTTCTCATGCAGCTATGCTTGACACTGGCAATTTTGTTCTTTCATCCTCTAATTCTTCCTATTTATGGCAAAGCTTCAACAATCCCACCGACACACTATTGCCATCCCAAACATTGGATCTTAATGGTAAGCTCTATTCTCGATTCACACAGAACAATTACACAAAGGGAAGGTTCGAGCTTTATTTCGATGAACAAAATCTGAAGCTGAGTCCCATTGGTTGGCCAACTGAATCTCGTTACGCTAGTTACTTAAGAGTGGATGCAAATGCTTCACAGGCACAGCTAGTGTTCAATGAAACGGGAGATATTTATGTAGAGACAAGTGGTGGAAGCAAAATATCCCTTGGATGGGACAATTCATATTTTGATGCTAACAGATTTTTCTACAGAGCTACACTTGAGTACTATGGAGTTTTCACGCAGTATTCTCTTCCAAAGGGATCCAGTGATGAGAACCAAGTTTGGTCAATTGTGAGGTATGTTCCTGGCAACATTTGCAATGACATATTTGATGAATTTGGTAGTGGTGGTTGTGGGTTCAATAGCTACTGTACTTGGGAAAATAATAGGCCAAATTGTTGGTGCCCAGAAGGGTATTCCATGGTTGATCCAAACAATGAATTTGGGGGATGCCAACCTAATTTCTCCTTAGGTTGTGGagctgattcacaagaaaatccaCAAGAGGTATATGAAATGAAGGTTCTACCAAATGTGAATTGGCCTTTGGGAGATTTTGAAAGGCTGATGAATTATACTCAAGATGAGTGTAAACAATCTTGCTTGTATGATTGTAACTGTGCTGCTGCTGTCTTTGGAAATCAGTGTTGGAAGAAAAGACTACCACTTTCTAATGGAAGACTAGACCAAAGTGCTGGAACCACAATAACtcttataaaattaagaattcGGCCACTTTCTGATACTGTTGTCAAAAAGGAAGATGGAGTACAGCATGCTGTTTTAGGATCACTAATTGGCTCCCTTGTCATTAATACTCTACTACTAGCTACGGTTGTTTTGATTCTTCTCTTGAAGTTCAAGGGCAAAGAGATTGTCAAAGTTTCCAGTCTTGTTGAAACAAATCTGCACTCTTTTACTTATCATGAACTGAAAGAGGCAACGCTGGGATTCAGTGAAGAAGTGGGAAGAGGTTCCTTTGGGATTGTGTACAAAGGCAGCCTAAAATCAGGAAGTGACAACAACGTTATTGCGGTGAAGAGGTTGGACAGGTTGGCTCAAGAACGAGAGAAGGAATTCAAGACTGAGTTGAGTGCCATTGGGAAAACATGCCACAAACATTTGGTTCGATTGATTGGGTTTTGTGACGAAGGAGTCCACAGGCTTCTAGTGTATGAGTTCATGAGCAATGGTACTCTTGCACAAATCCTCTTTGGACAACCCAAACCCATTTGGAATTTAAGGGTCAGATTTGCATTGGGGATAGCAAGAGGGCTGCTTTACTTACATGAAGAGTGTGACACCCCCATCATTCATTGTGATATAAAACATCAAAATATACTAATTGATCAACATTTCATGCCCAAAATCTCAGACTTCGGATTGGCCAAGTTGTTGTTGTGGGATCAGAGCAGAACTAATACGATGATAAGAGGAACAAGAGGATATGTGGCGCCAGAATGGTTCAAGAATGTGCCAGTGACTACAAAAGTGGATGTTTATAGCTTTGGGGTGATGCTGTTAGAGATCATTTGCTGCAGGAGAAGCGTGGTGAATGATGTGGATAGTGAGGAGGAAGAAAAGGTACTATTAACTGATTGGGCTTATGATTGCTATATGGAAAGGAGATTACACGTTTTGGTAGAGAATGATAGAGAGGCAATGGGAGACAAGGGGAGGTTGAAGAAGTGGGTGATGATAGCAATGTGGTGCATTCAAGAGAATCATGAAATAAGGCCTACCATGAAGACTGTGATGCTAATGTTGGAAGGCCATGTTGACGTCCCAGAACCACCATTGCCTTCCTCCTTCACTCTTACATCTTGA	2358	0.4042	MTIPNIFFLPLLLLVPHQAFANVTLNSTLSTNDPNPLWLSSSGVFAFGFQQINNNTSLFLLAIWFNKISSKTIVWTASTSNPAPAGSEVKLTAQGLTLTNPQGHLLWSVQVEPSEDVSHAAMLDTGNFVLSSSNSSYLWQSFNNPTDTLLPSQTLDLNGKLYSRFTQNNYTKGRFELYFDEQNLKLSPIGWPTESRYASYLRVDANASQAQLVFNETGDIYVETSGGSKISLGWDNSYFDANRFFYRATLEYYGVFTQYSLPKGSSDENQVWSIVRYVPGNICNDIFDEFGSGGCGFNSYCTWENNRPNCWCPEGYSMVDPNNEFGGCQPNFSLGCGADSQENPQEVYEMKVLPNVNWPLGDFERLMNYTQDECKQSCLYDCNCAAAVFGNQCWKKRLPLSNGRLDQSAGTTITLIKLRIRPLSDTVVKKEDGVQHAVLGSLIGSLVINTLLLATVVLILLLKFKGKEIVKVSSLVETNLHSFTYHELKEATLGFSEEVGRGSFGIVYKGSLKSGSDNNVIAVKRLDRLAQEREKEFKTELSAIGKTCHKHLVRLIGFCDEGVHRLLVYEFMSNGTLAQILFGQPKPIWNLRVRFALGIARGLLYLHEECDTPIIHCDIKHQNILIDQHFMPKISDFGLAKLLLWDQSRTNTMIRGTRGYVAPEWFKNVPVTTKVDVYSFGVMLLEIICCRRSVVNDVDSEEEEKVLLTDWAYDCYMERRLHVLVENDREAMGDKGRLKKWVMIAMWCIQENHEIRPTMKTVMLMLEGHVDVPEPPLPSSFTLTS	785

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto6g3432	785	SUPERFAMILY	alpha-D-mannose-specific plant lectins	59	182	IPR036426	-
	Sto6g3432	785	SMART	serkin_6	493	766	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto6g3432	785	Gene3D	-	20	144	IPR036426	-
	Sto6g3432	785	Pfam	PAN-like domain	350	395	IPR003609	-
	Sto6g3432	785	SMART	blect_4	26	145	IPR001480	-
	Sto6g3432	785	SUPERFAMILY	Protein kinase-like (PK-like)	476	767	IPR011009	-
	Sto6g3432	785	Gene3D	Phosphorylase Kinase; domain 1	460	571	-	-
	Sto6g3432	785	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	17	782	-	-
	Sto6g3432	785	Gene3D	Transferase(Phosphotransferase) domain 1	572	772	-	-
	Sto6g3432	785	ProSiteProfiles	Bulb-type lectin domain profile.	22	143	IPR001480	-
	Sto6g3432	785	PANTHER	MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN	17	782	-	-
	Sto6g3432	785	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	614	626	IPR008271	GO:0004672\|GO:0006468
	Sto6g3432	785	CDD	PAN_AP_plant	332	418	-	-
	Sto6g3432	785	ProSitePatterns	Protein kinases ATP-binding region signature.	499	524	IPR017441	GO:0005524
	Sto6g3432	785	Pfam	D-mannose binding lectin	72	159	IPR001480	-
	Sto6g3432	785	Pfam	Protein kinase domain	496	763	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto6g3432	785	PIRSF	SRK	1	785	IPR024171	GO:0004674
	Sto6g3432	785	ProSiteProfiles	Protein kinase domain profile.	493	772	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto6g3432	Sto-Chr6	40105773	40108130	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto6g3432	426	772	Receptor kinase-like Gene Family	AT1G56120	37.853	2.18e-65	232

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Sto6g3432		Pkinase	2.6e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto6g3432	-		-	gmx:100775269	961.829