LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto6g3431	ATGGCTATACccaacatcatcttcttcctccctcTTCTATTGCTTCTACCCCATCAAGCTTTTGCAAACGTTACTTTGAGTTCCACACTCTCCACCAACGATCAAAATCCTCTATGGCTTTCTCCTTCTCAAGATTTTGCTTTTGGCTTTCGAGAAATCAACAACACAAATCTCTTCTTGCTCGCCATCTGGTTCTACAAAATATCTGAACAAACCATCATCTGGAATGCATATACATCAAATCCAATACCTGCAGGATCCCAAGTTAAACTCACAGCACAAGGTCTCACACTCACTAATCCTCAAGGTGATGCTCTATGGAATACTTCACCATTGGAAGATGTTTCTTATGCAGCTATGCTTGACACTGGAAATTTTGTTCTTGCTTCCGCTAATTCTTCCTACTTGTGGCAAAGCTTCAACAATCCCACTGACACACTCTTGCCATCCCAAACACTGGATCTTAAGGGTAAGCTCTATTCTCGATTCACACACAACAATTACACAAAAGGAAGGTTTAAGCTTTACTTTGATAATACCACTCTTAGGCTCAGTATGCTTGGTTGGCCAACTGAATCTCTTTACGCCAATTACTTTAGTACCGACGCAAGCTCTGCAGCCAATTATAGTGACTTGGCTTCCCGGCTAGTGTTTGAAGAAAAAGGAGATATCTATGTAGCCACAGAGGGTGGAGGTAGAATAGAGTTTCGATGGAAAAAATTGGTTCTTGACGTTACCAGATATTACTACAGAGCCACACTTGAGTACTATGGAGTTTTCACAATCTATTCTCTTCCAAGGGGATCAAATGATAACCAAGTTTGGTCTATTGTGAGTTATGTTCCCGAAAACATTTGCAAGGACTTGCTTAGTGATTTAGGCAGTGGTTGTTGTGGGTACAATAGCTACTGTTCTTGGGAGAATGATAGGCCAATTTGCAGATGTGCAAACGAGGAAGGGTATTCTCTGGTTGACCCAGATAATCCATTTGGGGGATGCCAACCTAATTTGCCCTTAGGTTGTGAGGTTGATGAAGCACTATCACAGGAAAAGCTAGAAGAGGTATATGAAATGAAGGAGGCACGAAATGTGAATTGGCCTGAAGGAGATTATGAACGGCTGGATGGATACAATTTATCTGATTGTGAAAAGTCTTGCTTGTATGATTGTAATTGTGGTGCTGCCATTTTTAACAGTGCAAATCAGTGTTGGAAGAAAAGACTACCACTTTCTAATGGAAGACCAACCGGGACTGATGATGGAACCACAACAGCTTTAATCAAACTCAGAATTAGTCCACTTTCTGTTCCTGATTCTGTTGTGGAAAAGGATGGTGTAGTTGAGCCTGCGCTTTTAGGCTCACTTATTGCTTCCCTTGTAGTTAATACTCTACTTGCTGCCGCAGTTCTTTTGGTTCTTCTCTTAAGGCCAAAAAAGATTGTCAAAGTTTCAGTTCCAAGCCTTGTTGAGACAAATCTTCACTCTTTTACTTACCAAGCATTGAAAGAGGCAACGATGGATTTCAGTGAAGAACTAGGAAGGGGTTCCTTTGGGATTGTGTACAGAGGAACCTTCAAAACAGGATCCAACAACAATGATGTTGCAGTGAAGAGGTTGGACAGATTGGCCCCAGAACGAGAGAAGGAATTCAGGACAGAGTTGAGTTCCATTGGGAAGACATGCCACAAAAATTTGGTTCGGTTGATTGGGTTTTGTGACGAAGGAGTTCATAGAGTTCTGGTATATGAGTGCATGAACAATGGTACTCTTGCACACATCCTCTTTGGACAACCCAAACCAAATTGGAATTTAAGGGTGAGATTTGCATTAGGGATAGCAAGAGGGCTGCTTTACTTACATGAAGAGTGTGACAACCCCATCATTCATTGTGACATAAAACCACAAAATATACTAATTGATcaacatttcatccccaaaATTTCAGACTTTGGGTTGGCCAAGTTGCTGTTGGGGGATCAGAGCAAAACCAAGACCATGATAAGAGGCACAAGAGGATACGTGGCGCCAGAATGGTTCAAGAATGTGCCAGTGACTGCAAAAGTGGATGTGTATAGCTTTGGGGTGATGCTGTTAGAGATCATATGCTGCAGGAGAAGTGTGGTGATGGATATGGATAGTGGGGAGGAAGAGAAGGCAATACTAACAGATTGGGCTTATGATTGCTATTTGGAAAGGAGATTAGATGTTCTTGTAGAGAATGATAAGGAGGCAATGGAGGACGAAGGGAGATTGAAGAAGTTGGTGATGATAGCAATGTGGTGCATTCAAGAGAATCATGAAATAAGGCCTACCATGAAGACTGTGATGCAGATGTTGGAAGGTGTTGTTGATGTCCCAAATCCACCCTCGCCTTCTTCCTTCACCTCTTGTGCTTGA	2397	0.4126	MAIPNIIFFLPLLLLLPHQAFANVTLSSTLSTNDQNPLWLSPSQDFAFGFREINNTNLFLLAIWFYKISEQTIIWNAYTSNPIPAGSQVKLTAQGLTLTNPQGDALWNTSPLEDVSYAAMLDTGNFVLASANSSYLWQSFNNPTDTLLPSQTLDLKGKLYSRFTHNNYTKGRFKLYFDNTTLRLSMLGWPTESLYANYFSTDASSAANYSDLASRLVFEEKGDIYVATEGGGRIEFRWKKLVLDVTRYYYRATLEYYGVFTIYSLPRGSNDNQVWSIVSYVPENICKDLLSDLGSGCCGYNSYCSWENDRPICRCANEEGYSLVDPDNPFGGCQPNLPLGCEVDEALSQEKLEEVYEMKEARNVNWPEGDYERLDGYNLSDCEKSCLYDCNCGAAIFNSANQCWKKRLPLSNGRPTGTDDGTTTALIKLRISPLSVPDSVVEKDGVVEPALLGSLIASLVVNTLLAAAVLLVLLLRPKKIVKVSVPSLVETNLHSFTYQALKEATMDFSEELGRGSFGIVYRGTFKTGSNNNDVAVKRLDRLAPEREKEFRTELSSIGKTCHKNLVRLIGFCDEGVHRVLVYECMNNGTLAHILFGQPKPNWNLRVRFALGIARGLLYLHEECDNPIIHCDIKPQNILIDQHFIPKISDFGLAKLLLGDQSKTKTMIRGTRGYVAPEWFKNVPVTAKVDVYSFGVMLLEIICCRRSVVMDMDSGEEEKAILTDWAYDCYLERRLDVLVENDKEAMEDEGRLKKLVMIAMWCIQENHEIRPTMKTVMQMLEGVVDVPNPPSPSSFTSCA	798

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto6g3431	798	CDD	STKc_IRAK	512	781	-	-
	Sto6g3431	798	ProSiteProfiles	Protein kinase domain profile.	506	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto6g3431	798	ProSiteProfiles	Bulb-type lectin domain profile.	23	141	IPR001480	-
	Sto6g3431	798	Gene3D	-	26	184	-	-
	Sto6g3431	798	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	627	639	IPR008271	GO:0004672\|GO:0006468
	Sto6g3431	798	PIRSF	SRK	1	798	IPR024171	GO:0004674
	Sto6g3431	798	SUPERFAMILY	alpha-D-mannose-specific plant lectins	56	263	IPR036426	-
	Sto6g3431	798	ProSitePatterns	Protein kinases ATP-binding region signature.	512	537	IPR017441	GO:0005524
	Sto6g3431	798	Pfam	D-mannose binding lectin	72	156	IPR001480	-
	Sto6g3431	798	Pfam	Protein kinase domain	509	777	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto6g3431	798	Gene3D	Phosphorylase Kinase; domain 1	474	583	-	-
	Sto6g3431	798	SMART	serkin_6	506	779	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sto6g3431	798	PANTHER	MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN	15	796	-	-
	Sto6g3431	798	SMART	blect_4	27	143	IPR001480	-
	Sto6g3431	798	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	15	796	-	-
	Sto6g3431	798	Pfam	PAN-like domain	359	405	IPR003609	-
	Sto6g3431	798	Gene3D	Transferase(Phosphotransferase) domain 1	585	787	-	-
	Sto6g3431	798	SUPERFAMILY	Protein kinase-like (PK-like)	482	780	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto6g3431	Sto-Chr6	40099509	40101905	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto6g3431	455	797	Receptor kinase-like Gene Family	AT1G56120	38.218	2.11e-65	233

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Sto6g3431		Pkinase	6.2e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto6g3431	-		-	gmx:100775269	890.567