Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3430 ATGAATTCGAACCCCTTGGTGGGCTCATCCGAATCGGAAACCCAATCCCAAAACGAGAGGGTTACTAAACCCCCTCCTGCTCCTGCTGCTGTGTTCTCCCGAAGCTCGAGCTTGAGCAAATTGTGGCCATGCTTGAGTGATCACTGGGGTGAATTGCCCCTCAAAGAGGACGATTCACAGGACATGCTTCTCTACGCTGTACTCCGCGACGCCCTCCACGTGGGATGGCACCCCTCCCTCGATCCTCATGCCTCCACCACCCTCACTCTCAAATCAGAGCCGCCACAGGGAGACTACAACTACAAGGAGAAGCATTATCGAGGCGTGCGTCGACGGCCCTGGGGTAAGTTCGCCGCAGAGATCCGAGACCCCGCTAAGAATGGGGCTCGCCTCTGGCTCGGCACTTTTCAAACCGCTGAGGACGCCGCTCTCGCTTACGATAGAGCCGCATACAGGATGCGAGGCTCCCGGGCTCTCCTCAATTTCCCGCTCCTAGTCAACTCGGGTCAACCCGACCCAGTTAGACTCAGAACCAAGCGCTCCTATTCGGATCCTCTGGGTGCGCCCGACTCCATGCCCAAGCGACATAAGAAGTGGCTTTCACCTTCTCAAGATTTTGCTTTTGGATTTCAACAAATCAACAACACAAATCTCTTCTTGCTTGCCATTTGGTTCAACAAAATATCTACAAAAACCATCGTCTGGAATGCAAATACATCAAATCCAGCACCTGCTGGATCAGAGGTTAAGCTCACAGCACAAGGTCTCACACTCACTAATCCTCAAGGTCATCTTCTATGGAGTGTTCAAGTTGAACCGTCGCAAAATGTTTCTTACGGAGCTATGCTTGACACTGGCAACTTCGTCCTTGCATCCTCTAATTCTTCCTATTTATGGCAAAGCTTCAACAATCCCACTGACACACTCTTGCCATCCCAAACTTTGGATCTTAATGGTAAGCTCTATTCTCGATTCACACACAACAATTACACAAAGGGAAGGTTCGAGCTTTATTTCGATGAACAAAATCTGAAGCTGAGTCCCATTGGTTGGCCAACTGATTCACGTTACACCAATTACTATAGTGTAAACACAAGCTCCTCAGCCAATGCGAGTGGCTTGGCTTCACAACTAGTGTTCAATGATACAGGGGAAATTTATGTAGAGACAAAGGGTGGACGTAGAATAAACCTTGGATGGGGAGATTTGGCTCTTGATGTTACCACAAATTACTACAGAGTCACACTTGAGTACTATGGAGTTCTCACGTTGTATTCTCTTCCAAGGGGGGGTTCCACTGACAACCAAGTTTGGTCTGTTGTGAATTTTGTTCCCGAAAACATTTGCGTTGCTATATTTAGTGATTATGGTAGTGGTTGTTGTGGGTACAATAGCTACTGTTCTTGGCAAAGGACGAGGCCTATTTGCACGTGTCCAGAAGGGTATTCCTTGGTTGATCCCAACAACGAATTTGGAGGATGCCAACCTGATTTCTCACTGGGTTGTGGAGCTGATGATGTGGCTTCACAGGAAAATCCACAAGAGGTGTATGAGTTTAAGGTTCTGCAAAACGTGGATTGGCCTCTGGGAGATTATGAAAAGTTGTCTAATTATACTCAAGATGATTGCAAAAATTCTTGTTTGTATGATTGTAATTGTGGTGTTGCCATTCTTGACAGTGAAAATACTTGCTGGAAGAAAAGATTGCCTCTTTCTAATGGAAGAATAAACTCAGGCTCAGGTGGTGTGCAAATTCCTTTCTTCAAAACCAGGATTCGGCCACTAGGTAAGGTTGATCACAAAGAGGAAAACAGAGTTGAGCCTGCTGTTTTAGGCTCACTCATTACATCCCTTGTTATTAACACTCTACTTTTAGCCACGGTAGTAATTTTGTTTCTTCTCTTGAAGAGGAAAAAGATTGTCAAGGTTTCAGCTCCAAGTCTTGTTGAGACAAATCTTCACTCTTTTACTTACCAAGCACTGAAAGAGGCAACGATGGATTTCAGTGAAGAAGTAGGAAGGGGCTCATTTGGGATTGTGTACAAAGGAACCCTCAAAACAGGATCCAACAACAACGTTGTTGCAGTGAAGAGGTTGGACAGATTGGCCCCAGAACGAGAGAAAGAATTCAGGACAGAGTTGAGTTCCATTGGGAAAACATGCCACAAAAATTTGGTTCGGTTGATTGGGTTTTGTGACGAAGGAATTCACAGAGTTCTAGTGTATGAGTTCATGAGCAATGGTACTCTTGCACACATCCTCTTCGGACAACCCAAACCCATTTGGAATTTAAGGGTGAGATTTGCATTAGGGATAGCAAGAGGGCTGCTTTACTTACACGAAGAGTGTGACACCCCCATCATTCATTGCGACATAAAACCACAAAATATACTAATTGATCAACATTTGAGGCCCAAAATTTCAGACTTTGGGTTGGCAAAGTTGTTGTTGTGGGATCAGAGCAGAACCAAGACGATGATAAGAGGAACAAGAGGATACGTGGCGCCAGAATGGTTCAAGAACGTGCCAGTGACTGCAAAAGTGGATGTGTATAGCTTTGGGGTGATGCTATTAGAGATTATATGCTGTAGGAGAAGTGTGGTGATGGATATGGATAGTGAGGAGGAAGAAAAGGCAATACTTACAGATTGGGCATATGATTGCTATTTGGAAAGGAGATTAGACGTTCTTGTGGAGAATGATAGGGAAGCAATGGAAGACAAAGGAAGATTGAAGAAGTGGGTGATGATAGCATTGTGGTGCGTTCAAGAGAATCATGAAATAAGGCCTACCATGAAAACTGTGATGCAGATGTTAGAAGGTGTTGTTGATGTCCCAAATCCACCATAG 2850 0.4516 MNSNPLVGSSESETQSQNERVTKPPPAPAAVFSRSSSLSKLWPCLSDHWGELPLKEDDSQDMLLYAVLRDALHVGWHPSLDPHASTTLTLKSEPPQGDYNYKEKHYRGVRRRPWGKFAAEIRDPAKNGARLWLGTFQTAEDAALAYDRAAYRMRGSRALLNFPLLVNSGQPDPVRLRTKRSYSDPLGAPDSMPKRHKKWLSPSQDFAFGFQQINNTNLFLLAIWFNKISTKTIVWNANTSNPAPAGSEVKLTAQGLTLTNPQGHLLWSVQVEPSQNVSYGAMLDTGNFVLASSNSSYLWQSFNNPTDTLLPSQTLDLNGKLYSRFTHNNYTKGRFELYFDEQNLKLSPIGWPTDSRYTNYYSVNTSSSANASGLASQLVFNDTGEIYVETKGGRRINLGWGDLALDVTTNYYRVTLEYYGVLTLYSLPRGGSTDNQVWSVVNFVPENICVAIFSDYGSGCCGYNSYCSWQRTRPICTCPEGYSLVDPNNEFGGCQPDFSLGCGADDVASQENPQEVYEFKVLQNVDWPLGDYEKLSNYTQDDCKNSCLYDCNCGVAILDSENTCWKKRLPLSNGRINSGSGGVQIPFFKTRIRPLGKVDHKEENRVEPAVLGSLITSLVINTLLLATVVILFLLLKRKKIVKVSAPSLVETNLHSFTYQALKEATMDFSEEVGRGSFGIVYKGTLKTGSNNNVVAVKRLDRLAPEREKEFRTELSSIGKTCHKNLVRLIGFCDEGIHRVLVYEFMSNGTLAHILFGQPKPIWNLRVRFALGIARGLLYLHEECDTPIIHCDIKPQNILIDQHLRPKISDFGLAKLLLWDQSRTKTMIRGTRGYVAPEWFKNVPVTAKVDVYSFGVMLLEIICCRRSVVMDMDSEEEEKAILTDWAYDCYLERRLDVLVENDREAMEDKGRLKKWVMIALWCVQENHEIRPTMKTVMQMLEGVVDVPNPP 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3430 949 Gene3D - 180 304 IPR036426 -
Sto6g3430 949 Gene3D Phosphorylase Kinase; domain 1 631 744 - -
Sto6g3430 949 SMART serkin_6 666 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3430 949 ProSiteProfiles Bulb-type lectin domain profile. 183 303 IPR001480 -
Sto6g3430 949 SMART blect_4 190 305 IPR001480 -
Sto6g3430 949 ProSiteProfiles Protein kinase domain profile. 666 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3430 949 SUPERFAMILY DNA-binding domain 105 164 IPR016177 GO:0003677
Sto6g3430 949 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 196 949 - -
Sto6g3430 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Sto6g3430 949 Pfam AP2 domain 105 155 IPR001471 GO:0003700|GO:0006355
Sto6g3430 949 Gene3D AP2/ERF domain 104 165 IPR036955 GO:0003700|GO:0006355
Sto6g3430 949 CDD AP2 104 163 IPR001471 GO:0003700|GO:0006355
Sto6g3430 949 SMART rav1_2 105 169 IPR001471 GO:0003700|GO:0006355
Sto6g3430 949 MobiDBLite consensus disorder prediction 175 195 - -
Sto6g3430 949 CDD STKc_IRAK 672 941 - -
Sto6g3430 949 Gene3D Transferase(Phosphotransferase) domain 1 745 944 - -
Sto6g3430 949 Pfam PAN-like domain 518 565 IPR003609 -
Sto6g3430 949 Pfam D-mannose binding lectin 232 319 IPR001480 -
Sto6g3430 949 SUPERFAMILY alpha-D-mannose-specific plant lectins 219 307 IPR036426 -
Sto6g3430 949 MobiDBLite consensus disorder prediction 1 22 - -
Sto6g3430 949 CDD PAN_AP_plant 498 583 - -
Sto6g3430 949 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 196 949 - -
Sto6g3430 949 PRINTS Ethylene responsive element binding protein signature 106 117 IPR001471 GO:0003700|GO:0006355
Sto6g3430 949 PRINTS Ethylene responsive element binding protein signature 129 145 IPR001471 GO:0003700|GO:0006355
Sto6g3430 949 ProSiteProfiles AP2/ERF domain profile. 105 163 IPR001471 GO:0003700|GO:0006355
Sto6g3430 949 SUPERFAMILY Protein kinase-like (PK-like) 643 940 IPR011009 -
Sto6g3430 949 MobiDBLite consensus disorder prediction 1 31 - -
Sto6g3430 949 ProSitePatterns Protein kinases ATP-binding region signature. 672 697 IPR017441 GO:0005524
Sto6g3430 949 CDD B_lectin 206 305 IPR001480 -
Sto6g3430 949 Pfam Protein kinase domain 669 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3430 Sto-Chr6 40091999 40096939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3430 646 941 Receptor kinase-like Gene Family AT1G60800 40.594 3.16e-65 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sto6g3430 Pkinase 3.3e-47 CL0016
TF AP2/ERF-ERF Sto6g3430 Pkinase 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3430 - - gmx:100775269 920.613