Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3428 ATGAGATCCTATGTGTGGCGGCCATGGATGATGCCGGAGTGTCGCCATTTCTTCAACCTCGTTTGTCCCGACGCATGGCTTAAGCTCAATGGCTCATGCTCTGTGTGCCGGAACTCGCCGCTTCCCGAGCCGCTCTCCACGCCGTTGTAG 150 0.58 MRSYVWRPWMMPECRHFFNLVCPDAWLKLNGSCSVCRNSPLPEPLSTPL 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3428 49 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 39 IPR013083 -
Sto6g3428 49 PANTHER BNAANNG20290D PROTEIN 10 49 - -
Sto6g3428 49 SUPERFAMILY RING/U-box 8 40 - -
Sto6g3428 49 PANTHER RING-H2 FINGER PROTEIN ATL67 10 49 IPR044289 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3428 Sto-Chr6 40080017 40080166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3428 10 49 C3H Transcription Factor Family AT2G35910 62.500 6.60e-13 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3428 - - egr:108959117 82.4185