Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3424 ATGCATATAGAGGAATTGAAGGGAGGAGAGGTGGAAGGTGGAGAGGAAGAAAAGGAAAGCTTTGTTGTGTCTGATGTAAAAAAAGCTCTGGTTGGAGCCGGGGCTCGTGCGCTATTCTATCCAACTCTGCTTTATAACGTCGTTAGGAATAAGATTCAGACCGAGTTTCGGTGGTGGGATAAGGTTGATGAGAAAGTAAGCTTCTCCTTAATTCTGATGCACTTAATTTTTCAGTTCATATTATTAGGTGCTGTTCCATTCCCTATTGATGTCCCCCACTTAAAGGACCTTGGTGTACGAGCAGTCATCACATTGAATGAATCATATGAGACCTTGGTGCCAACCACCCTATATCATGCTCATGGAATTGACCATCTTGTGATTCCTACCAGAGACTACTGTTTTGCACCTTCATTGCGTGACTTATGCTGTGCTGTAGACTTCATTCATGAAAATGCATCTTCTGGACGGGTTACATACGTCCACTGCAAGGCTGGACGCGGTCGCAGCACAACTGTCGTTATTTGTTACCTGGTTCATCACAAGCTGATGACACCTGATGCTGCATATGATTATGTAAAGTCAATTCGGCCAAGGGTACTTCTAGCTTCTTCTCAGTGGCAAGCTGTTCTGGAATACTACCACCTTAGGGTTAGGAAAGCTGTTGCCTATGCTCCCTCAGCTAACCTAATAGCGAAAGCATCTTTGGCAGCAACAGCTTCACGAGACCTTGTAACATTTGATGATGGTTCTGTAGTTGTGGTAACGGAGTCGGATCTTGAAGGTTATGACCCAAGTATTTGTTCAAGGACTGGCGAGATATGGGCAGATTTGAGTGTGGTTTACCGTGTACGAGTTGCTGGACAGGCAGCATTGGCAAGAATATCATGCCTTTGGCTGCGGTATGGTACGCACCAGAAGGTTTCTACAGAGAAACTGAGCAGCACCAATCACTTGCAAGGCATAAGTGTTAATATCCATGTCTACTAA 990 0.4475 MHIEELKGGEVEGGEEEKESFVVSDVKKALVGAGARALFYPTLLYNVVRNKIQTEFRWWDKVDEKVSFSLILMHLIFQFILLGAVPFPIDVPHLKDLGVRAVITLNESYETLVPTTLYHAHGIDHLVIPTRDYCFAPSLRDLCCAVDFIHENASSGRVTYVHCKAGRGRSTTVVICYLVHHKLMTPDAAYDYVKSIRPRVLLASSQWQAVLEYYHLRVRKAVAYAPSANLIAKASLAATASRDLVTFDDGSVVVVTESDLEGYDPSICSRTGEIWADLSVVYRVRVAGQAALARISCLWLRYGTHQKVSTEKLSSTNHLQGISVNIHVY 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3424 329 ProSitePatterns Tyrosine specific protein phosphatases active site. 161 171 IPR016130 GO:0016311|GO:0016791
Sto6g3424 329 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 329 - -
Sto6g3424 329 PANTHER - 1 329 - -
Sto6g3424 329 Pfam Dual specificity phosphatase, catalytic domain 92 214 IPR000340 GO:0008138|GO:0016311
Sto6g3424 329 Gene3D Protein tyrosine phosphatase superfamily 73 221 IPR029021 -
Sto6g3424 329 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 71 216 IPR029021 -
Sto6g3424 329 SMART dsp_5 72 216 IPR020422 GO:0006470|GO:0008138
Sto6g3424 329 CDD PTPMT1 58 214 IPR044596 GO:0004721
Sto6g3424 329 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 140 208 IPR000387 GO:0016311|GO:0016791
Sto6g3424 329 ProSiteProfiles Dual specificity protein phosphatase domain profile. 67 219 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3424 Sto-Chr6 40055155 40057451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3424 1 329 Protein tyrosine phosphatase (PTP) family AT2G35680 56.303 8.02e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3424 - - gmx:100813907 475.322