Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3415 ATGACTCGGCGATGCTCTCATTGCAGCCACAATGGCCACAACTCAAGGACTTGCCCGAATCGCGGAGTTAAGCTTTTCGGAGTTCGATTGACGGATGGGTTGATCCGAAAGAGTGCGAGTATGAGCAATCTCAGCCACTATGCAGCTTCGGGCTCTGGAGCTCATCATGCCGGGTCTAACAATCCGGGTTCTCCCGGAGAGACGCCTGATCATGGTGCTGCTGAGGGTTACGCCTCCGAGGATTTTGTTCCTGGTTCATCCTCTTCTTCCCGTGAAAGAAAGAAGGGTGTTCCATGGACCGAGGAGGAACATAGAATGTTTTTACTTGGATTGCAGAAACTTGGAAAAGGTGATTGGCGTGGAATTGCACGAAATTATGTTATATCAAGGACACCTACGCAAGTAGCAAGCCATGCTCAGAAATATTTCATCAGGCAAAGCAACGTGTCTAGGAGGAAGAGACGTTCTAGTTTGTTTGACATTGTTGCAGACGAACACACAGAGGATCAATTGTCAAATTTGAAAATTGTTCATTTCCAATCTTGTGCAGATCATGGCATTATAGCCGACACACCAATGGAACCACAAGACTTATTGCCAGATGGTCATCCAGAGGCTGAAACAGAAGACAACGACCCCTTGCCTGCACCCCCAGCTCTTGATGAAGAGTGCGAATCCATGGATTCCACTTACTCAAATGATGGAGAACCTGCCTCTTTAAAGCCGGATAGCTCGCAATCACCGTACCCAGTGCTATATCCTGCGTACTACTCTCCTTTCTTCCCATTTCCTCTGCCCTATTGGTCAGGATACAGTCCAGAGCCCCCCATGAAGGAGACGACAGTGCATGAAGTGGTGAAGCCTACTGCAGTACATTCTAAAAGCCCAATCAATGTTGATGAATTGGTTGGCATGTCAAAACTGAGCTTAGGGGACTCCATTGGTGACTCTGGCCCTTCCTCTCTCTCGCTAAAACTCCAAAAAGGTCCTTCTCCGCAGTCAGCTTTTCATGCAACTCCAGCATGTGGCAATTCAAACATGAATGGCAGTGTGATCCATGCAGTTTAA 1068 0.4775 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGLIRKSASMSNLSHYAASGSGAHHAGSNNPGSPGETPDHGAAEGYASEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEHTEDQLSNLKIVHFQSCADHGIIADTPMEPQDLLPDGHPEAETEDNDPLPAPPALDEECESMDSTYSNDGEPASLKPDSSQSPYPVLYPAYYSPFFPFPLPYWSGYSPEPPMKETTVHEVVKPTAVHSKSPINVDELVGMSKLSLGDSIGDSGPSSLSLKLQKGPSPQSAFHATPACGNSNMNGSVIHAV 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3415 355 Gene3D - 97 149 - -
Sto6g3415 355 MobiDBLite consensus disorder prediction 190 246 - -
Sto6g3415 355 ProSiteProfiles SANT domain profile. 99 147 IPR017884 -
Sto6g3415 355 PANTHER TRANSCRIPTION FACTOR KUA1 1 348 - -
Sto6g3415 355 MobiDBLite consensus disorder prediction 47 99 - -
Sto6g3415 355 Pfam Myb-like DNA-binding domain 98 143 IPR001005 -
Sto6g3415 355 PANTHER BNAC01G21010D PROTEIN 1 348 - -
Sto6g3415 355 MobiDBLite consensus disorder prediction 230 246 - -
Sto6g3415 355 MobiDBLite consensus disorder prediction 314 342 - -
Sto6g3415 355 ProSiteProfiles Myb-like domain profile. 91 143 IPR001005 -
Sto6g3415 355 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 94 146 IPR006447 GO:0003677
Sto6g3415 355 CDD SANT 98 143 IPR001005 -
Sto6g3415 355 MobiDBLite consensus disorder prediction 47 66 - -
Sto6g3415 355 MobiDBLite consensus disorder prediction 1 21 - -
Sto6g3415 355 SMART sant 95 145 IPR001005 -
Sto6g3415 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 147 IPR017930 -
Sto6g3415 355 SUPERFAMILY Homeodomain-like 93 148 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3415 Sto-Chr6 40006654 40009320 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto6g3415 Myb_DNA-binding 1.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3415 - - ccaj:109807943 531.946