Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3398 ATGGTGAAGATAGATTTTGGTAGCATCAATGACTCTTTTAACTTGGCTTCCATCAAGGCCTACGTAGCAGAGTTCATAGCCACTCTTGTCTTCGTGTTTGCTGGCGTTGGATCAGCCATTGCTTACAATGAAGTGACAAAGGATGCAGCTTTGGATCCGGCGGGGCtggtggcggtggcggtggcTCATGCGTTTGCATTGTTCGTAGGGGTGTCGGTGGCAGCCAACATCTCCGGTGGCCATTTGAATCCAGCTGTCACTTTTGGATTGGCTATTGGAGGCAACATCACCATCCTAACCGGTATCTTTTACTGGATTAGCCAATTGCTTGGCTCCATAGTGGCATGCCTCCTTCTCAGCTTTGTCACCGGCAAGCAGAGCATTCCAACCCATGGACTAGCGTCAGGGGTGGGTGCAATTGAAGGTATAGTCTTCGAGATCGTTGCTACTTTTGGGCTGGTTTACACTGTGTACGCCACAGCGGCTGACCCCAAAAAGGGTTCCCTTGGTGTCATTGCACCAATAGCTATTGGGTTCATTGTGGGTGCTAACATCTTGGCTGCCGGTCCATTCAGTGGCGGTTCAATGAACCCGGCTCGTTCATTCGGTCCAGCTGTGGCGAGCGGCTCATTCGCGGATAACTGGATCTACTGGGTCGGCCCGTTGATCGGTGGGGGCTTGGCTGGGTTGATCTATGGTGATGTTTTTATTGGTTCCTATGCTGCGGTTCCTGCCGCTGAAAACTATCCTTGa 753 0.498 MVKIDFGSINDSFNLASIKAYVAEFIATLVFVFAGVGSAIAYNEVTKDAALDPAGLVAVAVAHAFALFVGVSVAANISGGHLNPAVTFGLAIGGNITILTGIFYWISQLLGSIVACLLLSFVTGKQSIPTHGLASGVGAIEGIVFEIVATFGLVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGSFADNWIYWVGPLIGGGLAGLIYGDVFIGSYAAVPAAENYP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3398 250 Pfam Major intrinsic protein 16 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3398 250 Gene3D Glycerol uptake facilitator protein. 2 244 IPR023271 -
Sto6g3398 250 PANTHER AQUAPORIN-8 1 250 IPR034294 -
Sto6g3398 250 PANTHER AQUAPORIN TIP2-2-RELATED 1 250 - -
Sto6g3398 250 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Sto6g3398 250 SUPERFAMILY Aquaporin-like 16 238 IPR023271 -
Sto6g3398 250 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3398 250 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3398 250 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3398 250 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3398 250 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3398 250 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3398 250 CDD MIP 19 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3398 250 TIGRFAM MIP: MIP family channel proteins 23 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3398 Sto-Chr6 39923791 39924879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3398 1 247 Major Intrinsic Protein MIP AT5G47450 78.138 8.94e-139 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3398 K09873 - fve:101300912 414.846