Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3392 ATGGTGGAGATTTCGAAGGAGGGAATGGCTGAGGAAGTTGCCATTATAGGAGGATTGGTAATGGCGCAATTTGTGTACGCTGGACAAGCTGTGCTGCTAAGCTATCTCATGTCTTTGGGGATCAGCCCTCTTACCATTGTTGTTTTCTCTTGCGTCTCTACCTTCCTCATCCTCTTCCCCTTTGCCGTCTATTTCGAAagGACTAAATGGCCCAAGAAGTTCAGTTTCAAGTTGATTCTACAGATATTGTTGCTTTCGTTTGGAGGGGTAACTCTGTTCCAGTCTTTCTTCCTTAAAGGCATAAAGCTAACTTCCCCAACTATGGGAACTGCCATGCCAAACCTTGCCCCAGGTCTTATCTTCATAATCGCTTGGATTTTCAGGTTAGAGAAGATCAGCATAAGATGCACATATAGTCAGGTGAAAATCATTGGCACATTAATCTGCGTGGTAGGGGCTCTCACAATGAGCATGATGCAGAGCATGTCCTCTGATGCGACCAAGACAGAGGTCCAATTGAAATTGACGTTGTCCTCCTCATCATATGCTGTATTTGATATGCACAAGATAACTGGTTGTCTTTATCTCATGGCTGCAGTCATCTTGTTATCAGGCAGCGTTGTCCTGCAGGCTTTTACTTTAGGAGACTTTCCTGCACCAATATCACTCTGCGCAATCACGGCCTTTTTTGGAGCCTTCATGACTGCAATTGCTCAGTTTCTTGAATATCACAAATTGGAAACTGGTTGGCCAGTTCTCAGTGTGCCAGAACTCATTGCCTATTTTGTTAcgGCAGGTGGGGTCAGTGGTTTATGTCTAAGCTTCAATGGATGGGCAGTGAAGAAGAAAGGGCCAGTGTTGGTCTCCATCTTTAGTCCCATAGGCACAGTCTGCTCCATAATTTTCTCTGTTGTGACACTTGGATACACTGTTAATATTGGAAGCCTTGCTGGTATGTTCCTCATGTTCACGGGGCTCTATTTCGTGCTTTGGGCTAAAGGAAAAGAAGGATTCGTGGATGGAGATATCTTAGAGACCAAGTTAGAGTCAGAGAAGCCACTCCTAAGTTGA 1071 0.4444 MVEISKEGMAEEVAIIGGLVMAQFVYAGQAVLLSYLMSLGISPLTIVVFSCVSTFLILFPFAVYFERTKWPKKFSFKLILQILLLSFGGVTLFQSFFLKGIKLTSPTMGTAMPNLAPGLIFIIAWIFRLEKISIRCTYSQVKIIGTLICVVGALTMSMMQSMSSDATKTEVQLKLTLSSSSYAVFDMHKITGCLYLMAAVILLSGSVVLQAFTLGDFPAPISLCAITAFFGAFMTAIAQFLEYHKLETGWPVLSVPELIAYFVTAGGVSGLCLSFNGWAVKKKGPVLVSIFSPIGTVCSIIFSVVTLGYTVNIGSLAGMFLMFTGLYFVLWAKGKEGFVDGDILETKLESEKPLLS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3392 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 158 - -
Sto6g3392 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 334 - -
Sto6g3392 356 Pfam EamA-like transporter family 191 330 IPR000620 GO:0016020|GO:0016021
Sto6g3392 356 Pfam EamA-like transporter family 20 157 IPR000620 GO:0016020|GO:0016021
Sto6g3392 356 PANTHER OS11G0588100 PROTEIN 13 356 - -
Sto6g3392 356 PANTHER WAT1-RELATED PROTEIN 13 356 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3392 Sto-Chr6 39874166 39875949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3392 3 347 Nodulin-like Gene Family AT5G47470 56.069 1.29e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3392 - - gmx:100809182 493.426