Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3359 atggagTTGAAGTCTTCTCATGTGTCTCCTGTTCTAACCGAACCCGTTCCCATGAACAAGTCAAGACTAGGAATCCATTCTAGTCTGTTAAGTTACTCCCAGCAAGATGCAGCCTCTGCTCCGGCTAAGTACACAAGAAGCGGTTCAAGGAAAAGTGTAGGCAGTCTGGATGATGTTCGCTGCAATGGATATCTTGATGCCATGAAGGCCTCTTCACCCCCGAGGAAGAAGGTTGTTAAGTCTTGTAATAACAACACTCACCTCTCTGCTTTTGACTCTGACAATGAGGACTATACCTCTTGGACGCTTGATTATCCATCGGCACTACACTATTTTGAGAATATCACTGAGCGTGCAAAGAATAAGCAGATTGCAATGTTTCTAGATTATGATGGAACTCTTTCTCCAATAGTAGATGATCCTGACGCTGCCTATATGTCCGAACCTATGCGTGCTACTGTGACAAGTGTGGCAAAGCATTTTCCCACTGCAATCATTAGCGGAAGAAGCCGCGACAAGGTTTTTGAATTAGTCAAATTAAGAGAACTCTACTATGCGGGTAGTCATGGGATGGACATTATTGGCCCTGTCTCTGACACTCTGTCCAATAACCATCCAGATTGTGTTAAATCTACTGACTATGAGGGAAAGGAGATATCTCTGTTTCAACCTGCAAAAGAATTCCTGCCTATGATCGACGAGGTTTTTAGAACCCTCGTCGACATAACGAAACATATAAAAGGCGCAAAAGTTGAAAACCACAAGTTTTGCGTTTCTGTACATTACCGTAATGTAGATGAGAATAATTGGATAACCGTTGGACAGCTTGTCCATGACATGTTAAAAGATTACCCACGTTTACGTTCAACTCACGGACGCAAGGTTTTAGAGATCCGTCCAGTGATTGATTGGAACAAAGGAAAAGCAGTTGAGTTTTTACTTGATTCTCTAGGGTTAACCAATAGAGATGACGTGCTTCCCATCTACATTGGGGATGATAAGACTGATGAAGATGCATTTAAGGTGCTGCGAGAGAGTAATAGAGGTTATGGGATATTGGTATCGTCGGTGAGGAAAGAAAGCAATGCCTTGTACTCTCTAAGGGACACAAGTGAGGTCATGAAATTTCTGCAACTGCTGGTGAATTGGAAGAGGCAACAAGACGACGACAAGAAGCAAGCACCATTTCTAGGCATTTGGTTTTGA 1206 0.4262 MELKSSHVSPVLTEPVPMNKSRLGIHSSLLSYSQQDAASAPAKYTRSGSRKSVGSLDDVRCNGYLDAMKASSPPRKKVVKSCNNNTHLSAFDSDNEDYTSWTLDYPSALHYFENITERAKNKQIAMFLDYDGTLSPIVDDPDAAYMSEPMRATVTSVAKHFPTAIISGRSRDKVFELVKLRELYYAGSHGMDIIGPVSDTLSNNHPDCVKSTDYEGKEISLFQPAKEFLPMIDEVFRTLVDITKHIKGAKVENHKFCVSVHYRNVDENNWITVGQLVHDMLKDYPRLRSTHGRKVLEIRPVIDWNKGKAVEFLLDSLGLTNRDDVLPIYIGDDKTDEDAFKVLRESNRGYGILVSSVRKESNALYSLRDTSEVMKFLQLLVNWKRQQDDDKKQAPFLGIWF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3359 401 CDD HAD_TPP 125 375 - -
Sto6g3359 401 Gene3D - 124 211 IPR023214 -
Sto6g3359 401 Gene3D - 223 396 IPR023214 -
Sto6g3359 401 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 1 390 - -
Sto6g3359 401 TIGRFAM T6PP: trehalose-phosphatase 122 381 IPR003337 GO:0003824|GO:0005992
Sto6g3359 401 Pfam Trehalose-phosphatase 127 371 IPR003337 GO:0003824|GO:0005992
Sto6g3359 401 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 390 IPR044651 GO:0004805|GO:0005992
Sto6g3359 401 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 126 344 IPR006379 -
Sto6g3359 401 SUPERFAMILY HAD-like 125 385 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3359 Sto-Chr6 39658502 39660509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3359 120 380 Trehalose Biosynthesis Gene Families AT1G70290 26.241 2.52e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3359 K01087 - pvy:116119386 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3359 6 39658502 39660509 Sto6g3359 6 39658502 39660509 ECH