Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3299 ATGACGTCGTCTCAGGAGCACGAGATGGATCAAGACGACGACGGAGGGACCTCCGACCTCAGCACCAGTGCCGGCGACCCAGTCGCCGCCGCCGACCAGAAAAATGGACTATCGAAACCACAAAACATCTCGCCGTTCCGAGTCTTGCCGTTGAAGGAGGAGCCCATTGATTCGGACACCCCGTCAGACCCGGAGCAAAAGACGCAGTCAGCGTCCTCTGCTCCGATTGGGGTCGTTCCGGTGGCGATGCAGATGCAAATGCCTTTATCCATGCCCGTGCCGATTTCTACAGCCAGACGCTCCTCCACAAAGGATCGCCACACGAAGGTCGAAGGCCGTGGCCGTAGGATCCGAATACCCGCTACTTGCGCGGCTCGGATCTTTCAGCTGACCCGGGAGTTGGGCCACAAGTCTGACGGCGAAACCGTGCGGTGGCTGCTCGAACACGCCGAGCAGGCCATCATCGAGGCCACCGGCACCGGCACTGTTCCAGCCATCGCCGTCTCCGTCGGAGGAACTCTGAAAATTCCCACAACATCGAGCGCTAACAGCAATCCCGATACTGAACTGAAGAAGAAACGGAAACGGCCATCGAATAGCGAGTTTGTTGACGTAAACGAAGCCGTTTCCCAATCATCCGGTCTTGCTCCGGTTCAACCGGCGGTACCGCAAGGTCTCGTGCCTGTGTGGGCAGTGGGAAACACTAATATGATGATTCCAGCGAACGCTTTTTGGATGATCCCACCACCGGCTGCGGCGACGACTCCGGTGACCGGGATTACAGGTTCGTCAAACCCACAACCTCAGATATGGGCTTTATCTCCGACAGTGACTCCCGTATTCAACATGTCGGCGAGACCCGTATCATCCTTAGTGACGGCAACAAATATGTCGAGCGGCGTGGAGGTTTCGCCGGTGGGATGCAACAATTCGCCGAACACGGCGGCGGTAAGTACGAGCACGGTGGGGGCGAAGGTGGCGAAGAAGTCGACGATGGCACCAAGCGTGAGTTGTAGCGGAGCGacagCGACTGTGAAAGGAGGGAGAGGGGAGGGCGAGAGGAGTACGGACTACGAAGGcattagagttttgaccttgaAGCACGTGAATGGGAAGATTGACACGTGTGGAGAaagcATATATGCAATACTGACAGCTGTCGCTAACAAAACACAATCACATAATAGGGCTCAGATCTGTATAACAGTAAGAGGAAGCTGGGCCGTCAATGAATTCAAAATGTTCATTCAGCCCAAACTTTAcccaaaagggaaaaaaaagaagaagaaatctcAGCCTCTCAATATACTAAAACGCTACAATGTATCATAA 1332 0.5278 MTSSQEHEMDQDDDGGTSDLSTSAGDPVAAADQKNGLSKPQNISPFRVLPLKEEPIDSDTPSDPEQKTQSASSAPIGVVPVAMQMQMPLSMPVPISTARRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSSANSNPDTELKKKRKRPSNSEFVDVNEAVSQSSGLAPVQPAVPQGLVPVWAVGNTNMMIPANAFWMIPPPAAATTPVTGITGSSNPQPQIWALSPTVTPVFNMSARPVSSLVTATNMSSGVEVSPVGCNNSPNTAAVSTSTVGAKVAKKSTMAPSVSCSGATATVKGGRGEGERSTDYEGIRVLTLKHVNGKIDTCGESIYAILTAVANKTQSHNRAQICITVRGSWAVNEFKMFIQPKLYPKGKKKKKKSQPLNILKRYNVS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3299 443 MobiDBLite consensus disorder prediction 177 202 - -
Sto6g3299 443 Pfam TCP family transcription factor 102 182 IPR017887 -
Sto6g3299 443 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 13 338 IPR005333 GO:0003700
Sto6g3299 443 PANTHER TRANSCRIPTION FACTOR TCP9-LIKE 13 338 - -
Sto6g3299 443 ProSiteProfiles TCP domain profile. 103 157 IPR017887 -
Sto6g3299 443 MobiDBLite consensus disorder prediction 1 76 - -
Sto6g3299 443 MobiDBLite consensus disorder prediction 187 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3299 Sto-Chr6 39221784 39224810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3299 99 270 TCP Transcription Factor Family AT2G45680 60.209 3.87e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto6g3299 TCP 3.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3299 - - zju:107405250 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3299 6 39221784 39224810 Sto6g3299 6 39221784 39224810 ECH