Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3278 ATGGGTAAAGCATCCAAATGGTTTCGTGGTCTTCTTCTCGGTCGAAAAAAGACGGACTCCTCCTCTCCCACTGCCTCTGCTTCCAGACCACCCAAAGACAAACGCATATGGAGATTCGGAAAATCTTATAGGCTAAATGATAACCTCCATGCTAACACCGCTCAACCTTCTATTCCAAACAACCACACTCACGCCCACGCCCATGAACTCAGGCTTCCTACCAGCGCCAGCGCCAGGTGCGCCGCTGGAAATCGCGAACAATGGGCGGCCGTTAAGATTCAATCCGTTTTTCGCGGCTGTTTGGCAAGGAGAGCATTGCGAGCATTAAAGGGATTGGTAAAGCTTCAAGCATTGGTGAGAGGTCATATTGAGAGGAAGCGGAACGCTGAGAGGCTGCAGAAAATGCACGTGCTCTTGCGAGCACAGGCGCGAGCCCGTGCAGGGCGGCTCAACTCATATTTGGCGGCTAAGTCATCAAATGTCCACCTCCATAGTCCAGCAACACCAGACAAGTTTGAAAACTCAATTAGATCCAAGAGCATGAAATATGACCAGTCATGCTTGCTCAAGATCAATGGCAATCAAGAGAAATATTGGAATACAACAGATAGTTGGGTGGATGAGAAATCATGGAATCGACAAAGATCTTCGGAAGATGAAAGAAATGTGAAGACCCTGGAAATGGATTCTGGAAGACCACACTGGACACCAAAACGCAGAGCCAGAAACCTCTTCCAGTTCACTAACAACAGTTTGGATTCTTATAGTCAGAGTTTTAGCTCCACAAAGGATTCAACAACATATCAGTCAGGTCCAATAATTCATTGTTATGATGAAGTCCAAGATGAGGAAGAGGAGAGCCCATTCTGCACAGCCCACAATAGTCCTCAATATTTGTCAGGGTACTCTGGTGGGTCCAGAAGAAGTACTCCTTTTACTCCCACCAGGAGTGATGGTTCAAGAAGCAATCTAAGTGCTTATTCTGAGTGCCCAAGTTACATGGCATGCACAGAATCTTCAAAGGCAAAGATGAGATCTTTGAGTGCTCCAAAACAAAGGCCTCCTCAGTATGAGAGGTGTGGTTCAACAAGTAGGTACTCAATGAATGGAAATGGGGAGTCAAGATTGAATGCACAGAGTCATCACAGGGCATATGGTTTGCAAGCAAGCTTCAATAGCAAAGCCTATCCTGGGTCTGGTCGTTTGGACAAGCTTGGTATGCCTATGGGGTATAGATACTGA 1242 0.4654 MGKASKWFRGLLLGRKKTDSSSPTASASRPPKDKRIWRFGKSYRLNDNLHANTAQPSIPNNHTHAHAHELRLPTSASARCAAGNREQWAAVKIQSVFRGCLARRALRALKGLVKLQALVRGHIERKRNAERLQKMHVLLRAQARARAGRLNSYLAAKSSNVHLHSPATPDKFENSIRSKSMKYDQSCLLKINGNQEKYWNTTDSWVDEKSWNRQRSSEDERNVKTLEMDSGRPHWTPKRRARNLFQFTNNSLDSYSQSFSSTKDSTTYQSGPIIHCYDEVQDEEEESPFCTAHNSPQYLSGYSGGSRRSTPFTPTRSDGSRSNLSAYSECPSYMACTESSKAKMRSLSAPKQRPPQYERCGSTSRYSMNGNGESRLNAQSHHRAYGLQASFNSKAYPGSGRLDKLGMPMGYRY 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3278 413 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
Sto6g3278 413 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 408 - -
Sto6g3278 413 Gene3D - 83 137 - -
Sto6g3278 413 MobiDBLite consensus disorder prediction 290 324 - -
Sto6g3278 413 MobiDBLite consensus disorder prediction 287 324 - -
Sto6g3278 413 MobiDBLite consensus disorder prediction 344 367 - -
Sto6g3278 413 Pfam IQ calmodulin-binding motif 88 107 IPR000048 GO:0005515
Sto6g3278 413 ProSiteProfiles IQ motif profile. 110 136 IPR000048 GO:0005515
Sto6g3278 413 PANTHER IQ-DOMAIN 5-RELATED 1 408 - -
Sto6g3278 413 Pfam Protein of unknown function (DUF4005) 302 382 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3278 Sto-Chr6 39058819 39061731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3278 87 413 IQD Protein Family AT4G23060 40.413 4.15e-56 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3278 - - gmx:100793587 373.244