Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3272 ATGCCGCTGGGAAGCCTCGAAGTTCTTCTGGTTAGTGCCAAGGGTCTTGAGGACACCGATTTTCTCAATAACATGGATCCTTATGTGATCCTCACATGTCGAACTCAGGAGCAGAAAAGCAGTGTTGCATCAGGAAAAGGATCAGATCCGGAGTGGAATGAGAATTTTGTTTTCAACGTGACTGAAGGCGTTTCGGAACTCAAATTGAAGATTATGGACAGTGATTGCGGCACTGACGATGATTTCGTGGGAGAAGCAACCATCCCGCTAGATGTTTTGTTCACCGAAGGAAGCATCCCACCCACAATATACAATGTTGTCAAGGGTGAGGAGTATCGTGGGGAGATTAAAGTTGGCCTCACTTTTACGCCCGAGGAGCGCAGCAGAGAGTATGTAGAGGAGGAAAGCTTTGGTGGATGGAAGGAGTCTTCTTACAGAGATTAA 444 0.4685 MPLGSLEVLLVSAKGLEDTDFLNNMDPYVILTCRTQEQKSSVASGKGSDPEWNENFVFNVTEGVSELKLKIMDSDCGTDDDFVGEATIPLDVLFTEGSIPPTIYNVVKGEEYRGEIKVGLTFTPEERSREYVEEESFGGWKESSYRD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3272 147 SMART C2_3c 5 102 IPR000008 -
Sto6g3272 147 Gene3D C2 domain 2 125 IPR035892 -
Sto6g3272 147 Pfam C2 domain 4 96 IPR000008 -
Sto6g3272 147 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 125 IPR035892 -
Sto6g3272 147 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Sto6g3272 147 PANTHER C2 DOMAIN-CONTAINING 3 143 - -
Sto6g3272 147 PANTHER OS02G0640000 PROTEIN 3 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3272 Sto-Chr6 39025334 39027386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3272 3 97 C2H2 Transcription Factor Family AT4G21160 31.579 1.15e-09 53.5