Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3259 ATGATGTTATGTACTTCATTCTTGTTTCTCGGTCTAATTTCCTCGCTCTCTATCGTGTCTTGTGCTACCGTACCCTCAAACGAAGTTTGGGCGCTTACGACCTTCAAAGAGGCTGTGTATGAAGACCCCTATCTAGCTTTGTCCAATTGGATTACACTGGATTCAGATCCTTGTGATTGGTTTGGCGTTTTTTGCACTACTGCTCGAGATCATGTCATTAAGCTAAACATTTCAGGTTCATCTTTAAGAGGATTTCTTTCACCAGAATTGGGACAAATCACCTACTTGCAAGAACTGGTTTTGAACGGCAACAATTTGATTGGAACAATTCCTAAAGAGTTGGGCATGTTGACTTCTCTTAAGGTCTTGGACTTGGGGACCAATCAGTTGTCTGGTCCAATTCCTCCAGAGATTGGAAATCTAGAGCAAGTTGTGaaaatAAACCTGCAGTCCAATGGGTTGACTGGTAGGATACCTTCTAATCTTGGAAATTTGAAGAACCTTCAAGAACTTCGACTGGGCAGGAATAAGCTTCAAGGACCTCTTCCTGCTGGTGGCAGTTCAAACTTCTCTGCAAATATGCATGGAATGTATGCCTCAAGTGCAAATTTAACTGGTTTCTGTGGTTCGTCTCAGTTAAAAGTTGCAGATTTTTCATATAACTACTTTGTTGGTAGCATACCCAATTGCTTGACGTTTCTACCAAGGTCAAGCTTTCAAGGGAATTGCTTCCAGGGCAAAGAATTAAAACAGCGTGCTTCTGAGGAATGTGCTGGTGCTTCACCTGCCAAGAGCAGTCCAGTGGTCAATACAAAACACCAGACCGCAGAATATGTGTCCAAGCATcatggagcatcaaaacctgCCTGGCTTTTGGTTCTAGAAATAGTGACAGGAACCTTGGTTGGTTCTCTCTTTTTGGTCGCTGTTTTCACTGCTCTAAAGAGGTGTAACAACAAATCATCAATCATTAATCCATGGAGGAAATCTACAAGCCAGAAGGACCATATGGCAGTATATATAGACTCTGATTTGCTGAAGGATGTAAGGAGTTATAGCAGACAAGAGCTTGAAGTGGCATGTGAAGACTTTAGCAACATCATTGGATCCTCACCAGACAGTGTAGTCTACAAGGGCACCATGAAAGGTGGGCCTGAGGTTGCTGTACTTTCCCTCTGCATTAAGGAGGAGTACTGGACGGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGTCAAGGTTAAATCATGAGAATATAGGAAAACTACTGGGATATTGTAGAGAGAGCACTCCATTTACAAGGATGCTGGTTTTTGAGTATGCTTCAAACGGGACACTTTCTGAACACTTACATTATGGAGAAGGATGCCAGTTATCCTGGACTCAGCGTATGAGAATCGTTATGGGCATTGCTCGCGGACTCAGGTATCTACACACGGAAGTTGACCCTCCATTCACAATATCAGAGTTGAATTCTAGTGCCGTATACCTTACAGAAGATTTTTCCCCTATGCTGCTTGATTTTGAAAGTTGGAAGACAATTTTGGAAAGGTCAGAAAAGAATTCTGATTCTGTAGGGAGCCAAGGTGCTGTTTGTGTTCTTCCACATTCTCTAGAGGCTCGCCGTTTCGATCCCCAAGGAAATGTACATGCTTTTGGCATACTTCTATTGGAGATAATCAGCGGGAGACGTCCATATTGCAAGCACAAAGGTTCCTTGGTGGATTGGGCCGAGGAGTATCTTAAAATTCCAGAATTAATGTCACATTTGGTGGATCCTCAATTGAAACACATCAGAAATGATGACCTCAAAGTAGTATGCGAGGTAATTAATCTTTGTATCAATCCAGACCCTACGAGGCGTCCATCCATGGCAGAACTATGTAATATGCTAAGCAGGATTGACACATCAACGAGTCTAGATCTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCACTTTCATCATAG 1980 0.4222 MMLCTSFLFLGLISSLSIVSCATVPSNEVWALTTFKEAVYEDPYLALSNWITLDSDPCDWFGVFCTTARDHVIKLNISGSSLRGFLSPELGQITYLQELVLNGNNLIGTIPKELGMLTSLKVLDLGTNQLSGPIPPEIGNLEQVVKINLQSNGLTGRIPSNLGNLKNLQELRLGRNKLQGPLPAGGSSNFSANMHGMYASSANLTGFCGSSQLKVADFSYNYFVGSIPNCLTFLPRSSFQGNCFQGKELKQRASEECAGASPAKSSPVVNTKHQTAEYVSKHHGASKPAWLLVLEIVTGTLVGSLFLVAVFTALKRCNNKSSIINPWRKSTSQKDHMAVYIDSDLLKDVRSYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEVAVLSLCIKEEYWTGYLELYFQREVADLSRLNHENIGKLLGYCRESTPFTRMLVFEYASNGTLSEHLHYGEGCQLSWTQRMRIVMGIARGLRYLHTEVDPPFTISELNSSAVYLTEDFSPMLLDFESWKTILERSEKNSDSVGSQGAVCVLPHSLEARRFDPQGNVHAFGILLLEIISGRRPYCKHKGSLVDWAEEYLKIPELMSHLVDPQLKHIRNDDLKVVCEVINLCINPDPTRRPSMAELCNMLSRIDTSTSLDLKSSSLAWAELALSS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3259 659 Gene3D Phosphorylase Kinase; domain 1 335 443 - -
Sto6g3259 659 Pfam Protein tyrosine and serine/threonine kinase 366 634 IPR001245 GO:0004672|GO:0006468
Sto6g3259 659 Gene3D Ribonuclease Inhibitor 25 254 IPR032675 -
Sto6g3259 659 PANTHER PROTEIN MALE DISCOVERER 2 6 659 - -
Sto6g3259 659 SUPERFAMILY L domain-like 26 235 - -
Sto6g3259 659 Gene3D Transferase(Phosphotransferase) domain 1 444 651 - -
Sto6g3259 659 ProSiteProfiles Protein kinase domain profile. 362 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3259 659 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 659 - -
Sto6g3259 659 SUPERFAMILY Protein kinase-like (PK-like) 343 634 IPR011009 -
Sto6g3259 659 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3259 Sto-Chr6 38949540 38953383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3259 2 637 Receptor kinase-like Gene Family AT2G01210 27.098 3.19e-60 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Sto6g3259 PK_Tyr_Ser-Thr 7.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3259 - - gmx:100794714 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3259 6 38949540 38953383 Sto6g3259 6 38949540 38953383 ECH