Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3253 ATGGATGGGAGAGAAGGTATGACATTCTCAGGAGGCCCTGCTTCATATTACATACATAGAGGAGGCATTGCTGGGTCTGCCTCTGGAACACATACTGGAGCGTTCCAAGCACCCCCTGGGTTCAGACCAAACACAGGCACTCCAACACAGCCATATGTCCGAGGTAGCCCTGTGGGTCCTACATATTCTTCAGTAGAGCCTCAGCCTGGGCGCACCAGTTATAGTCATAGTCATGATCATGGTCATGGCATTAGCATAGGCTCGTCTTCAGGTGAGCctgtaaaaaggaaaagaggaaGGCCTAGAAAATATGGTCCTGATGGTCCTGTTTCTTTGGGATTGTCTCCAATGTCTGTCACTGCTAACTCTACTCCTGCCCCAACCTCTCCATCCCAGAAACGGAGTAGAGGGCGCCCAAAAGGATCTGGAAGGAAACAAAAGCTAGCAaatttagGTGAATGGATGAACAGTTCAGCTGGGATGGCTTTTGCACCTCATGTTGTCACTATTGAAGCTGGAGAGGACATTGTAGCAAAATTATTGTCAATTTCACAGCAGAGACCAAGAGTTCTGTGCATCTTGTCAGCCACCGGGTCAGTTTCATCTGTTACTCTGCGTCAGCCTGCTTCTACCGCCGTCAGTATCACCCTCGAGgGCCAATTTCAAATATTGTGCTTGTCTGGTTCCTACTTGGTTGCCGAAGATGGTGGCATCCGCAAAAGAACAGGTGGCCTGAGTGTTTCCCTTGCTAATCCTGAAGGTCATGTTATTGGCGGTGGGGCTGCTATGCTTATCGCCGCAACCCCGGTGCAGGTGGTGGTGTGCAGTTTTGTATATGGAGGATCGAAGACCAAGACTAAGCAAGTGAGTACATCCAAGGAAGAAGAGAATAGTGAGGGTGAGAATGAAGACAAGTTAGGCACTCCAGCTAGTGCTCAAAACTACAGCCAATCAGTAAGAGGCATGTGGCCATCAGGAATTGTGAACATAGAAAACTTTCCAAGATCAGCTGAAACAGACTTGTATGTGGATGTACCTTATCCAAGATGGGAAATTCTGATTTGA 1065 0.4714 MDGREGMTFSGGPASYYIHRGGIAGSASGTHTGAFQAPPGFRPNTGTPTQPYVRGSPVGPTYSSVEPQPGRTSYSHSHDHGHGISIGSSSGEPVKRKRGRPRKYGPDGPVSLGLSPMSVTANSTPAPTSPSQKRSRGRPKGSGRKQKLANLGEWMNSSAGMAFAPHVVTIEAGEDIVAKLLSISQQRPRVLCILSATGSVSSVTLRQPASTAVSITLEGQFQILCLSGSYLVAEDGGIRKRTGGLSVSLANPEGHVIGGGAAMLIAATPVQVVVCSFVYGGSKTKTKQVSTSKEEENSEGENEDKLGTPASAQNYSQSVRGMWPSGIVNIENFPRSAETDLYVDVPYPRWEILI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3253 354 SUPERFAMILY AF0104/ALDC/Ptd012-like 162 279 - -
Sto6g3253 354 MobiDBLite consensus disorder prediction 286 311 - -
Sto6g3253 354 MobiDBLite consensus disorder prediction 22 145 - -
Sto6g3253 354 Pfam Plants and Prokaryotes Conserved (PCC) domain 165 278 IPR005175 -
Sto6g3253 354 ProSiteProfiles PPC domain profile profile. 158 299 IPR005175 -
Sto6g3253 354 CDD DUF296 165 277 IPR005175 -
Sto6g3253 354 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 332 - -
Sto6g3253 354 MobiDBLite consensus disorder prediction 288 303 - -
Sto6g3253 354 MobiDBLite consensus disorder prediction 42 72 - -
Sto6g3253 354 Gene3D - 165 296 - -
Sto6g3253 354 MobiDBLite consensus disorder prediction 115 136 - -
Sto6g3253 354 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 332 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3253 Sto-Chr6 38920432 38924193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3253 1 334 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.459 8.93e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3253 - - jre:109014458 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3253 6 38920432 38924193 Sto6g3253 6 38920432 38924193 ECH