Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3251 ATGTATGCTAGGATTGGTATGGGTTGTGAGTTTTCTAAGTTCTCAGCTTGCTGCCGGGGAACAGAGCCAAATCGTCCAGCTCCCGAGGCCCAGATTGATGAAAATGAAGAGAAACGCAAAGCTGATAATTTGCCGCCTTTTCATGAATACACAATTGATCAACTTCGGAAGGCTACATCTGGATTTTCTGTAGAAAATATAGTTTCTGAGCATGGAGAAAAGGCTCCGAATGTGGTCTACAAAGGGAAACTTGAAAATCAAATGCAAATTGCTGTAAAACGATTTAACAGATCAGCCTGGCCAGATGCTCGGCAATTTTTGGATGAAGCCACGGCCGTTGGTCAGCTTAGGAACGAGAGATTGGCAAATCTTCTTGGCTGTTGCTGTGAAGATGGTGAGAGGTTACTTGTTGCAGAATACATGCCTAATGATACTTTGGCAAAACACTTGTTCCATTGGGAAACTCAGCCTATGAAATGGCCAATGCGACTAAGAGTTGCTTTATACCTTGCCCAAGCATTAGAATATTGTACCAGCAGAGGACGTGCTCTATATCATGATCTTAATGCTTACAGAGTTCTCTTTGATGATGAAGGCAATCCTAGACTTTCATGCTTTGGTTTGATGAAAAACAGTCGAGATGGAAAAAGTTATAGCACAAATCTGGCATTCACTCCACCTGAGTATTTGAGAACCGGTCTACTAATCCAGTTCTTATCTCCTCCGAGTTGTTTCTCTTCCTCATCCAATTTCGTCTTTCTTGTTAAGATTCATGTTTTGAGAACTGGATTAGTCTTAATCCAGATAAGACGTTGCCTTACCAGTAGAGTTACTCCAGAAACTGTAACATATAGCTTTGGCACTCTTTTGCTTGATCTTCTCAGTGGAAAACATATCCCTCCAAGCCAAGCACTTGACCTGATTCGGAACAGAAACCTTCAGATGCTGACAGACTCCTGTTTAGTAGGACAATTTTCAGATCACGAGGGGACTGAGTTATTGCGGTTAGCCTCAAGATGTTTACAATCTGAACCACAAGAGCGTCCTAATCCTAAGTCATTGGTTAATGCTTTAATACCTTTGCAAAAGGATTCCGAGGTTCCTTCTTATGTGTTTATGGATATACCAcatgctgctgctgctgcttcaCCTCTGTCACCGCTTGGTGAAGCTTGTCTTAGAATGGACTTGACTGCCATGCATGAGGTCATAGAAAAGATCGGGTATAAAGATGATGAGGGTGTTGCAACAGAGCTTTCATTTCAAATGTGGACCAACCAAATGCAGGAGACATTGAACTCAAAGAACAAGGGTGATGCTGCTTTTCGACACAAGGATTTGAAAACTGCAATCGATAACTACACACAGTTCATTGATGTTGGAACCACGGTTTCTCCGACAGTTTACGCACGTCGGAGTCTATCTTATCTCATGAGTGATATGCCTGAGGAAGCACTTAATGATGCATTTCAGGCACAAATAATATCCCCCTTCTGGTACATAGCATCCTATTTACAAGCTGCTGCTCTTTTTGCACTGGGCAGGGAGAATGAGGCCCATGTGGCACTTAAAGAGGGTTCTTCACtcgaaaataaaaagaatacaaaTTAG 1611 0.4122 MYARIGMGCEFSKFSACCRGTEPNRPAPEAQIDENEEKRKADNLPPFHEYTIDQLRKATSGFSVENIVSEHGEKAPNVVYKGKLENQMQIAVKRFNRSAWPDARQFLDEATAVGQLRNERLANLLGCCCEDGERLLVAEYMPNDTLAKHLFHWETQPMKWPMRLRVALYLAQALEYCTSRGRALYHDLNAYRVLFDDEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGLLIQFLSPPSCFSSSSNFVFLVKIHVLRTGLVLIQIRRCLTSRVTPETVTYSFGTLLLDLLSGKHIPPSQALDLIRNRNLQMLTDSCLVGQFSDHEGTELLRLASRCLQSEPQERPNPKSLVNALIPLQKDSEVPSYVFMDIPHAAAAASPLSPLGEACLRMDLTAMHEVIEKIGYKDDEGVATELSFQMWTNQMQETLNSKNKGDAAFRHKDLKTAIDNYTQFIDVGTTVSPTVYARRSLSYLMSDMPEEALNDAFQAQIISPFWYIASYLQAAALFALGRENEAHVALKEGSSLENKKNTN 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3251 536 MobiDBLite consensus disorder prediction 20 41 - -
Sto6g3251 536 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 272 536 IPR045845 GO:0004672|GO:0009742
Sto6g3251 536 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 7 234 IPR045845 GO:0004672|GO:0009742
Sto6g3251 536 Gene3D Tetratricopeptide repeat domain 429 536 IPR011990 GO:0005515
Sto6g3251 536 SUPERFAMILY TPR-like 434 530 IPR011990 GO:0005515
Sto6g3251 536 Gene3D Phosphorylase Kinase; domain 1 35 140 - -
Sto6g3251 536 ProSiteProfiles Protein kinase domain profile. 65 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3251 536 Pfam Protein tyrosine and serine/threonine kinase 78 230 IPR001245 GO:0004672|GO:0006468
Sto6g3251 536 Gene3D Transferase(Phosphotransferase) domain 1 142 375 - -
Sto6g3251 536 PANTHER TPR DOMAIN KINASE 7 234 - -
Sto6g3251 536 PANTHER TPR DOMAIN KINASE 272 536 - -
Sto6g3251 536 SUPERFAMILY Protein kinase-like (PK-like) 43 370 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3251 Sto-Chr6 38903894 38909404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3251 20 358 Glycoside Hydrolase AT3G07070 27.882 1.35e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Sto6g3251 PK_Tyr_Ser-Thr 7.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3251 K14500 - gmx:100819210 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3251 6 38903894 38909404 Sto6g3251 6 38903894 38909404 ECH