Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3235 ATGGAGAACAAAGAAGAAGATGTGAAGGTTGGAGCAAACAAATTCTCAGAGAGGCAGCCATTGGGAACCGCAGCTCAGACCGACAAGGACTACAAGGAGCCACCACCAGCTCCCCTGTTCGAGCCAGGCGAGCTCAAGTCATGGTCCTTTTACAGAGCCGGCATCGCCGAGTTCGTAGCCACCTTCTTGTTCCTCTACATCACCATCCTCACCGTCATGGGCGTTAACCGCTCACCCTCCAAGTGTTCCTCCGTGGGAATCCAAGGCATTGCTTGGGCTTTTGGTGGCATGATCTTTGCCCTTGTCTACTGTACTGCTGGAATTTCagATCTGATGaaatttgggttgggttgggttgggacAGGTGGACACATCAACCCTGCTGTGACATTTGGTCTGTTCTTGGCGAGGAAGCTGTCCTTGACAAGGGCAGTGTTCTACATGGTGATGCAGTGTCTTGGAGCCATATGTGGTGCTGGTGTTGTAAAGGGGTTTGAAGGTGGTGCTAGGTATGAGATGTACAAAGGTGGAGCTAATATTTTGAGCTCTGGATACACCAAGGGTAGTGGTCTTGGAGCTGAGATTGTGGGCACTTTTGTACTTGTTTACACTGTTTTCTCTGCCACTGATGCCAAGAGAAATGCTAGAGACTCTCACGTTCCTATTTTGGCTCCTCTTCCCATTGGGTTTGCTGTGTTCTTGGTGCATTTGGCAACCATTCCCATCACAGGCACTGGCATAAACCCAGCAAGGAGTCTGGGTGCAGCCGTCATCTTCAACAAAGACGTTGCCTGGGATGATCAATGGATCTTCTGGGTTGGACCTTTCATTGGAGCTGCCCTTGCTGCTGTATATCATCAGATAGTCATCCGAGCCATTCCTTTCAAGACAAGGGCTTAA 900 0.4833 MENKEEDVKVGANKFSERQPLGTAAQTDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVNRSPSKCSSVGIQGIAWAFGGMIFALVYCTAGISDLMKFGLGWVGTGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGGARYEMYKGGANILSSGYTKGSGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAVIFNKDVAWDDQWIFWVGPFIGAALAAVYHQIVIRAIPFKTRA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3235 299 MobiDBLite consensus disorder prediction 1 35 - -
Sto6g3235 299 ProSitePatterns MIP family signature. 124 132 IPR022357 -
Sto6g3235 299 CDD MIP 52 289 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3235 299 SUPERFAMILY Aquaporin-like 44 291 IPR023271 -
Sto6g3235 299 Gene3D Glycerol uptake facilitator protein. 37 297 IPR023271 -
Sto6g3235 299 TIGRFAM MIP: MIP family channel proteins 56 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3235 299 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 298 IPR034294 -
Sto6g3235 299 Pfam Major intrinsic protein 44 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3235 299 PANTHER AQUAPORIN PIP1-6 1 298 - -
Sto6g3235 299 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3235 299 PRINTS Major intrinsic protein family signature 106 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3235 299 PRINTS Major intrinsic protein family signature 143 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3235 299 PRINTS Major intrinsic protein family signature 193 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3235 299 PRINTS Major intrinsic protein family signature 229 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto6g3235 299 PRINTS Major intrinsic protein family signature 269 289 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3235 Sto-Chr6 38808770 38810023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3235 1 298 Major Intrinsic Protein MIP AT4G23400 83.612 4.50e-173 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3235 K09872 - gmx:100793242 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3235 6 38808770 38810023 Sto6g3235 6 38808770 38810023 ECH