Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3233 ATGCCATCATGGTGGGGAAAGTCTTCGTCCAAAGAGATCAAGAGGAAAGAAAATAGGGGAAGCATTATTGGTACAATACAGCGCAAGATAAAAAGTGCTTCTGAAGACAAGAGCAATGATAAATCCAGAGGATCTAGAAGACATCATTCTGTCTTAAATAAGGGATCCAGATCTCTTATGCTTGAATCACCATCTCCCTCCACAAATGTGTCCCGATGTCAAAGCTTTGCAGAAAGGCCTCATGCCCAACCACTCCCACTGCCAGGGTTGCAATTTTCAACCATCAGTCGGACAAACTCTGCAATTAGTGTAGCATCAAAACTGGAAAATGCCAGAGGCTCCAAGCCATCTCTGTATTTTCCCCTACCAAGACCTGGATGTGCTTCTAACCTGGGAGAACCTACTGATGCTGAAAGAGATATTGCCACTGCATCTGTTTCCAGTGTCAGCTCTACTGACAGTGATGAACCATCTGATTCAAGCCACCTTAATCCTCTGGCATCTGACTGTGAAAATGTAAACATGGCCACCCATAACAGTTCCTTTAGCGTGGTGCACAAGGATCAATCATCTGTTACTATCCCGAAGAATTCAAGAAACTTGTCAAAACCAGCTCCTCAACTGTGCAATTATCAGTCTATATCTCCTAAAGGGGGGCAACTGCAACTGAAGAATCTTCAAATAGCTCGCTCAGCTGGTCTATGCAGTGCTCCAGTTAGTTCAATCTCAAGTCCCACTAGAAGTCCAATGAGAGCCTTTGGTCCTGAGCAAGCTTTAAATGCTGGACTCTGGACAGGGAAGCCATGTTCTGATATACCTTCTGGACACTGCTCAAGTCCAGGCTCGGGTCATAATTCTGGGCATAACTCTGTTGGTGATCTGTTGGGGCAGGGATTTTGGCCACAAAGCAGGTGCAGCACTGAGTGTTCTCCAATACCTAGTCCTAGAATGACAAGCCCTGGTCCCAGCTCGAGGATACACAGTGGTGCTGTCAGCCCACTGCATCCACGAGCAAGAGGCACTGCAACGGAGTCACCTACAGTACGTCCTGATGATGGGAAACCACAAACTCATCCGTTACCTCTTCCTCCAATAACTATCAATAATTCTTGTCCTTTTTCACCAACTTATTCTGCGGCAACAACTCCTTCAGCTCCGCGTAGTCCTACCAGAGTTGAAAATCCAATAAGCCCTGGTTCACGCTGGAAAAAAGGGCAATTAATTGGAAGGGGAACATTTGGGCATGTATATCTTGGATTTAACAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAATCCTTTTTTCAGATGATGCAAAATCAAGGGAATGTGCACAGCAACTTGGCCAAGAAATTACAGTGCTAAGTCGCTTGCGTCATCCTAATATAGTTCAATATTATGGATCTGAGACGGTAGATGACAAACTTTATATTTACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAACTTCTTCAAGAATATGGCCAGTTTGGTGAAATTGCCATTCGTAATTATACTCGGCAAATTCTGTCAGGTCTTGCATATTTACATGCCAAGAACACTGTCCATAGGGACATTAAAGGAGCAAACATATTGGTGGATCCTAATGGGCGTGTAAAATTGGCAGATTTTGGGATGGCAAAGCATATAACTGGGCAGTCTTGTCCTTTTTCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGgttataaaaaattcaaaggGTTGTAATCTTGCTGTTGATATATGGAGCCTTGGCTGCACTGTTTTGGAGATGGCTACAACAAAACCTCCTTGGAGCCAGTACGAAGGGATTGGGAACAGCAAGGAATTTCCTACACTTCCAGATAATCTATTAGAGGATGGAAAAGATTTTGTCAGGCTTTGTTTGCAAAGAAACCCACTAAATCGTCCCTCAGCTGCTCAACTTCTGGAGCATCCATTTGTGAAAAATGCTACACTGGAAAGACCTATTCTGATCGCTGATCCTTCAGAAGCACCATCAGCTGTTACAAATGCAGTGAGATCTCTGGCCGTTGGAACTGCAAGACATAAACCATGCATAGATTCTGAGACGATTGGTATCCATCCATATAGAAGCTTGAAAACTGGTTCAAAATCAagTGATACCCATACACCAAGGAACATCTCATGCCCTGTTTCCCCAATTGGGAGCCCACATTTGCCTTCTAGATCACTGCTTGCAAGTGGAAGGATGTCTCCCTCTCCAATATCAACTCCTCACGCTGTATCTGGCTCATCCACCCCTCTGACTGGCGGCAATGGTGCGATCCCATTCCATCAAGCAAAGCAGCCAACATTCTCATATGAAGGTGTTGGTATGATCCAAAGGTCTCGAGTCAGTTTCTATCCAAATGGCAGCACTGGTTATTATGAGGCAAAGCATGAACCGTTTAAGGGGCATCCACAAACCACCCATACTAGCCAGGATATTACTTCATTTGATAAAGATGCTATAGCAAACCAGATGAGGAGGCCTTTCCGGGAATGCCCAAGAGGATTTTATGATGGTAAGTCATATTTAGCTGATTGCGTTTCACAGCAGCTGTTAAGGGATAATGCAAGAGTCAATTCATCCATAGATCTTAAGCCCAATAGTACCCCAATGCTAGGCCGCATAAATGGCCTTTGA 2661 0.4412 MPSWWGKSSSKEIKRKENRGSIIGTIQRKIKSASEDKSNDKSRGSRRHHSVLNKGSRSLMLESPSPSTNVSRCQSFAERPHAQPLPLPGLQFSTISRTNSAISVASKLENARGSKPSLYFPLPRPGCASNLGEPTDAERDIATASVSSVSSTDSDEPSDSSHLNPLASDCENVNMATHNSSFSVVHKDQSSVTIPKNSRNLSKPAPQLCNYQSISPKGGQLQLKNLQIARSAGLCSAPVSSISSPTRSPMRAFGPEQALNAGLWTGKPCSDIPSGHCSSPGSGHNSGHNSVGDLLGQGFWPQSRCSTECSPIPSPRMTSPGPSSRIHSGAVSPLHPRARGTATESPTVRPDDGKPQTHPLPLPPITINNSCPFSPTYSAATTPSAPRSPTRVENPISPGSRWKKGQLIGRGTFGHVYLGFNSESGEMCAMKEVILFSDDAKSRECAQQLGQEITVLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGQFGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHITGQSCPFSFKGSPYWMAPEVIKNSKGCNLAVDIWSLGCTVLEMATTKPPWSQYEGIGNSKEFPTLPDNLLEDGKDFVRLCLQRNPLNRPSAAQLLEHPFVKNATLERPILIADPSEAPSAVTNAVRSLAVGTARHKPCIDSETIGIHPYRSLKTGSKSSDTHTPRNISCPVSPIGSPHLPSRSLLASGRMSPSPISTPHAVSGSSTPLTGGNGAIPFHQAKQPTFSYEGVGMIQRSRVSFYPNGSTGYYEAKHEPFKGHPQTTHTSQDITSFDKDAIANQMRRPFRECPRGFYDGKSYLADCVSQQLLRDNARVNSSIDLKPNSTPMLGRINGL 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3233 886 MobiDBLite consensus disorder prediction 275 292 - -
Sto6g3233 886 MobiDBLite consensus disorder prediction 369 395 - -
Sto6g3233 886 MobiDBLite consensus disorder prediction 738 764 - -
Sto6g3233 886 MobiDBLite consensus disorder prediction 30 46 - -
Sto6g3233 886 MobiDBLite consensus disorder prediction 1 90 - -
Sto6g3233 886 SUPERFAMILY Protein kinase-like (PK-like) 400 653 IPR011009 -
Sto6g3233 886 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 798 - -
Sto6g3233 886 MobiDBLite consensus disorder prediction 275 403 - -
Sto6g3233 886 MobiDBLite consensus disorder prediction 113 167 - -
Sto6g3233 886 CDD STKc_MEKK1_plant 401 652 - -
Sto6g3233 886 ProSiteProfiles Protein kinase domain profile. 402 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3233 886 Gene3D Transferase(Phosphotransferase) domain 1 400 676 - -
Sto6g3233 886 SMART serkin_6 402 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3233 886 MobiDBLite consensus disorder prediction 300 326 - -
Sto6g3233 886 MobiDBLite consensus disorder prediction 702 769 - -
Sto6g3233 886 MobiDBLite consensus disorder prediction 704 722 - -
Sto6g3233 886 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 798 - -
Sto6g3233 886 Pfam Protein kinase domain 403 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3233 886 ProSitePatterns Protein kinases ATP-binding region signature. 408 431 IPR017441 GO:0005524
Sto6g3233 886 MobiDBLite consensus disorder prediction 56 76 - -
Sto6g3233 886 MobiDBLite consensus disorder prediction 141 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3233 Sto-Chr6 38794828 38801988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3233 1 878 MAP Kinase Kinase Kinase AT1G63700 59.933 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sto6g3233 Pkinase 1.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3233 K20717 - vvi:100263296 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3233 6 38794828 38801988 Sto6g3233 6 38794828 38801988 ECH